Factsheet for VIT_05s0077g02020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	73.19	73.19
VIT_05s0077g02010.t01	Wine grape	cytosol	72.56	72.56
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	40.38	67.02
KRH50813	Soybean	cytosol	44.48	65.28
PGSC0003DMT400029422	Potato	cytosol	62.78	61.23
PGSC0003DMT400011790	Potato	cytosol	62.15	60.99
VIT_14s0060g01940.t01	Wine grape	cytosol	60.88	60.88
KRH02278	Soybean	cytosol	67.82	60.73
CDY09722	Canola	cytosol	62.78	60.49
GSMUA_Achr3P08130_001	Banana	cytosol	60.25	60.25
Bra012747.1-P	Field mustard	cytosol	62.46	60.0
Solyc05g054320.2.1	Tomato	cytosol	60.57	59.81
Solyc12g099430.1.1	Tomato	cytosol	60.88	59.75
GSMUA_Achr8P10290_001	Banana	cytosol	59.94	59.56
PGSC0003DMT400060254	Potato	extracellular	60.25	59.5
CDX90550	Canola	cytosol	61.83	59.39
GSMUA_Achr8P22510_001	Banana	peroxisome	50.79	58.97
VIT_07s0005g00700.t01	Wine grape	cytosol	58.68	58.68
Solyc01g066470.2.1	Tomato	cytosol, peroxisome	35.96	58.46
Solyc01g066460.2.1	Tomato	cytosol, peroxisome	35.96	58.46
GSMUA_AchrUn_...	Banana	peroxisome	58.36	58.36
HORVU3Hr1G070810.3	Barley	cytosol, peroxisome	18.93	58.25
Solyc05g054350.2.1	Tomato	plastid	58.68	57.94
CDY09727	Canola	cytosol	59.62	57.8
CDX90553	Canola	cytosol	59.31	57.67
Bra012750.1-P	Field mustard	cytosol	59.31	57.67
PGSC0003DMT400060250	Potato	cytosol	58.36	57.63
AT4G15955.3	Thale cress	cytosol	55.2	57.57
TraesCS7D01G228900.1	Wheat	cytosol	55.84	57.47
TraesCS7A01G225600.1	Wheat	cytosol	58.04	57.14
Os05t0273800-01	Rice	cytosol, peroxisome, plastid	59.31	56.8
CDY57860	Canola	cytosol	54.26	56.58
TraesCS7D01G224000.1	Wheat	unclear	57.1	56.21
TraesCS7B01G129100.1	Wheat	cytosol	57.1	56.21
TraesCS7B01G128800.1	Wheat	cytosol	56.78	55.9
Os01t0255000-01	Rice	cytosol	56.47	55.59
TraesCS7B01G128900.1	Wheat	unclear	56.47	55.59
TraesCS7B01G194000.1	Wheat	cytosol	56.15	55.11
PGSC0003DMT400029420	Potato	cytosol	57.73	54.79
EES00506	Sorghum	cytosol	56.15	54.77
Solyc01g066450.2.1	Tomato	cytosol	57.73	54.63
TraesCS7A01G222400.1	Wheat	cytosol	52.05	54.46
TraesCS3B01G204900.1	Wheat	peroxisome	55.2	54.35
TraesCS3D01G180600.1	Wheat	peroxisome	54.89	54.04
TraesCS3A01G175200.2	Wheat	peroxisome	53.94	53.11
Os01t0255100-01	Rice	cytosol	53.94	52.78
TraesCS7D01G224200.1	Wheat	golgi, unclear	57.73	52.14
TraesCS7A01G222600.1	Wheat	golgi, unclear	57.73	51.99
HORVU7Hr1G045640.2	Barley	plastid	57.41	51.7
VIT_03s0038g00100.t01	Wine grape	cytosol, mitochondrion, plastid, vacuole	18.61	51.3
VIT_05s0077g02030.t01	Wine grape	mitochondrion	15.14	51.06
AT4G15960.1	Thale cress	mitochondrion	60.25	50.93
VIT_15s0021g02470.t01	Wine grape	cytosol	50.16	50.16
HORVU3Hr1G070830.1	Barley	cytosol, peroxisome	27.13	49.43
HORVU7Hr1G045620.2	Barley	cytosol, mitochondrion, peroxisome	23.97	49.35
VIT_04s0023g02610.t01	Wine grape	golgi, mitochondrion, peroxisome	49.21	49.06
EES17023	Sorghum	extracellular, plastid, vacuole	56.47	47.86
HORVU3Hr1G035400.1	Barley	plastid	55.84	43.7
VIT_03s0038g00090.t01	Wine grape	cytosol	15.46	38.89
VIT_00s0370g00070.t01	Wine grape	cytosol, peroxisome, plastid	35.65	36.45
VIT_12s0059g00230.t01	Wine grape	cytosol, peroxisome, vacuole	35.02	35.46
VIT_12s0059g00210.t01	Wine grape	peroxisome	34.07	34.5
VIT_12s0059g00220.t01	Wine grape	peroxisome	34.07	34.5
VIT_00s0370g00060.t01	Wine grape	peroxisome, plasma membrane, plastid	32.81	33.44
GSMUA_Achr3P24120_001	Banana	cytosol	58.99	29.5

Protein Annotations

EntrezGene:100246529	wikigene:100246529	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
ProteinID:CCB48025	ProteinID:CCB48025.1	InterPro:Epox_hydrolase-like	UniProt:F6H6W4	EMBL:FN595246	GO:GO:0003674
GO:GO:0003824	InterPro:IPR029058	EntrezGene:LOC100246529	wikigene:LOC100246529	PFAM:PF00561	PRINTS:PR00111
PRINTS:PR00412	PANTHER:PTHR43329	PANTHER:PTHR43329:SF13	SUPFAM:SSF53474	TIGR:TC57613	TIGR:TC66779
UniParc:UPI00015CB829	ArrayExpress:VIT_05s0077g02020	EnsemblPlantsGene:VIT_05s0077g02020	EnsemblPlants:VIT_05s0077g02020.t01	unigene:Vvi.25602	unigene:Vvi.8986
RefSeq:XP_002270853	RefSeq:XP_002270853.1	:	:	:	:

Description

No Description!

Coordinates

chr5:+:1571722..1573179

Molecular Weight (calculated)

35810.7 Da

IEP (calculated)

5.054

GRAVY (calculated)

-0.100

Length

317 amino acids

Sequence
(BLAST)

001: MEGIEHTTVR ANGINIHLAE KGQGPIILLL HGFPEFWYSW RHQIHALASL GYRAVAPDLR GYGDSDAPAD VDSYTYFHLV GDLIGVLDAI GADKVFVVGH
101: DWGAFIGWNL CLFRPDRVKA LVNLSVSFSP RNAMNKPLQT FRALYGDDYY ICRFQEPGAI ETEFAEIGID KVLKYFLTSL PAGPLFLPKG KALRDQLGIP
201: ITLPSWLSEE ELNYYVTKYE NTGFTGGLNY YRNLDLSWEL TAPWTGSQVE VPAKFIVGDL DLTYNTPGFN ESMTFDELKK HVPLLEEVVV MKGVGHFLQE
301: EKADEINQHI HAFFQRF

Best Arabidopsis Sequence Match ( AT4G02340.1 )
(BLAST)

001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL

Arabidopsis Description

AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.