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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90553 Canola cytosol 97.25 97.55
AT4G15955.3 Thale cress cytosol 80.43 86.51
KRH50813 Soybean cytosol 42.51 64.35
CDY09722 Canola cytosol 64.22 63.83
CDX90550 Canola cytosol 63.61 63.03
VIT_05s0077g01990.t01 Wine grape cytoskeleton, cytosol, peroxisome 60.24 62.15
CDY57860 Canola cytosol 56.88 61.18
VIT_05s0077g02010.t01 Wine grape cytosol 59.02 60.88
PGSC0003DMT400011790 Potato cytosol 59.94 60.68
Solyc12g099430.1.1 Tomato cytosol 59.33 60.06
VIT_05s0077g02020.t01 Wine grape cytosol 57.8 59.62
Solyc01g066460.2.1 Tomato cytosol, peroxisome 35.47 59.49
KRH02278 Soybean cytosol 63.91 59.04
Solyc01g066470.2.1 Tomato cytosol, peroxisome 34.25 57.44
CDY65636 Canola peroxisome 54.43 56.33
Solyc05g054350.2.1 Tomato plastid 55.05 56.07
PGSC0003DMT400060250 Potato cytosol 55.05 56.07
CDY50394 Canola peroxisome 54.13 56.01
PGSC0003DMT400029422 Potato cytosol 55.66 56.0
CDX77051 Canola cytosol 27.83 55.49
Solyc05g054320.2.1 Tomato cytosol 54.43 55.45
PGSC0003DMT400060254 Potato extracellular 54.43 55.45
CDY65635 Canola cytosol 53.21 55.24
CDY48181 Canola peroxisome 52.91 54.23
CDY50393 Canola cytosol 40.67 53.41
VIT_05s0077g02000.t01 Wine grape cytosol, mitochondrion, peroxisome 30.58 52.36
CDX77050 Canola peroxisome 25.99 51.83
CDX77049 Canola peroxisome 25.99 51.83
CDY05187 Canola cytosol 53.52 51.47
Solyc01g066450.2.1 Tomato cytosol 52.6 51.34
PGSC0003DMT400029420 Potato cytosol 52.29 51.2
CDY27752 Canola cytosol 51.99 50.0
VIT_05s0077g02030.t01 Wine grape mitochondrion 13.15 45.74
CDX73754 Canola cytosol, peroxisome, plastid 23.24 44.44
CDY33304 Canola peroxisome 41.28 41.67
CDY26530 Canola peroxisome 41.28 41.67
CDX77971 Canola cytosol, peroxisome, plastid 39.14 39.51
CDX90672 Canola mitochondrion 37.31 25.58
CDY28994 Canola mitochondrion 37.61 17.06
CDX90673 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY09727EnsemblPlantsGene:GSBRNA2T00031405001Gene3D:3.40.50.1820GO:A0A078F9H7GO:GO:0003674GO:GO:0003824
InterPro:AB_hydrolaseInterPro:AB_hydrolase_1InterPro:Epox_hydrolase-likeInterPro:IPR029058PANTHER:PTHR43329PANTHER:PTHR43329:SF13
PFAM:PF12697PRINTS:PR00111PRINTS:PR00412ProteinID:CDY09727ProteinID:CDY09727.1SUPFAM:SSF53474
UniParc:UPI0004EEA8DCUniProt:A0A078F9H7MapMan:35.2:::
Description
BnaC07g33340DBnaC07g33340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9H7]
Coordinates
chrLK031998:+:661412..662771
Molecular Weight (calculated)
37671.2 Da
IEP (calculated)
6.894
GRAVY (calculated)
-0.249
Length
327 amino acids
Sequence
(BLAST)
001: MDLTFTHRFV KVNGINMHFA EKTPSFTDNG ASRPPPVILF LHGFPELWYT WRHQMAALSS LGYRTIAPDL RGYGDTEAPE SADAYTSLHV VGDLIGLIDA
101: VVGGDREKVF VVGHDWGAVI AWHLCLLRPD RVKALVNMSV VFEPWNLKRK PISMFKSFYG DDYYICRFQE YGEIEAEFAK VGTERVLLEM LTYRNPGPIL
201: LPKGKSYDDP VSLPSWLTEY DVKYYVSKYE KSGFTGPVNY YRNMDRTWEM MGAFSNAQVK VPVKFIIGDQ DLTYHIPRTK KYIHDGRFKS HVPLLDEVVV
301: LKGVGHFLHE ERPDEISKHI HDYFLTF
Best Arabidopsis Sequence Match ( AT4G15955.3 )
(BLAST)
001: MDLTFDHSFV KVNGITMHVA EKSPSVAGNG AIRPPVILFL HGFPELWYTW RHQMVALSSL GYRTIAPDLR GYGDTDAPES VDAYTSLHVV GDLIGLIDAV
101: VGDREKVFVV GHDWGAIIAW HLCLFRPDRV KALVNMSVVF DPWNPKRKPT STFKAFYGDD YYICRFQLLE ILIKIHVCIV GKRYDDSVSL PSWLTDSDVK
201: YYVSKYEKNG FTGPVNYYRN MDRTWELMGS LSNAKVKVPV KFIIGDQDLT YHIPGSKKYI HDGRFKSHVP LLDEVVVIKG VGHFIHEERP DEISKHIHDY
301: FLTF
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JKY3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.