Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G51000.1 | CDX77049 | AT2G26740.1 | 21798944 |
AT3G51000.1 | CDX77050 | AT2G26740.1 | 21798944 |
AT3G51000.1 | CDX77051 | AT2G26740.1 | 21798944 |
AT3G51000.1 | CDY48181 | AT2G26740.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX90673 | Canola | cytosol | 31.48 | 98.7 |
CDX90672 | Canola | mitochondrion | 64.22 | 97.06 |
CDY33304 | Canola | peroxisome | 35.37 | 78.7 |
CDY26530 | Canola | peroxisome | 35.37 | 78.7 |
AT3G51000.1 | Thale cress | cytosol | 34.4 | 76.78 |
CDX77971 | Canola | cytosol, peroxisome, plastid | 33.15 | 73.77 |
CDX73754 | Canola | cytosol, peroxisome, plastid | 15.81 | 66.67 |
KRH69845 | Soybean | cytosol | 26.77 | 59.02 |
KRH08141 | Soybean | cytosol | 26.63 | 58.72 |
VIT_04s0023g02610.t01 | Wine grape | golgi, mitochondrion, peroxisome | 25.24 | 57.23 |
Os12t0636400-01 | Rice | cytosol, peroxisome | 22.05 | 49.07 |
TraesCS5D01G065000.1 | Wheat | cytosol | 22.05 | 48.77 |
OQU79732 | Sorghum | cytosol | 21.36 | 47.68 |
Zm00001d041217_P002 | Maize | extracellular | 21.36 | 47.53 |
Zm00001d031203_P001 | Maize | cytosol | 21.64 | 47.42 |
EES17493 | Sorghum | cytosol | 21.36 | 47.24 |
TraesCS6A01G029300.1 | Wheat | cytosol | 21.36 | 47.09 |
TraesCS5A01G053600.1 | Wheat | cytosol | 21.91 | 47.02 |
Zm00001d031204_P003 | Maize | cytosol | 21.36 | 45.16 |
HORVU6Hr1G005400.4 | Barley | cytosol, peroxisome, plastid | 21.91 | 43.53 |
CDY65636 | Canola | peroxisome | 19.0 | 43.35 |
CDY50394 | Canola | peroxisome | 18.86 | 43.04 |
CDY05187 | Canola | cytosol | 20.25 | 42.94 |
CDY50393 | Canola | cytosol | 14.7 | 42.57 |
CDY65635 | Canola | cytosol | 18.45 | 42.22 |
CDX77051 | Canola | cytosol | 9.57 | 42.07 |
CDY27752 | Canola | cytosol | 19.69 | 41.76 |
CDY48181 | Canola | peroxisome | 17.75 | 40.13 |
CDY09722 | Canola | cytosol | 17.48 | 38.3 |
CDX90550 | Canola | cytosol | 17.34 | 37.88 |
CDX90553 | Canola | cytosol | 17.06 | 37.73 |
CDY09727 | Canola | cytosol | 17.06 | 37.61 |
CDY57860 | Canola | cytosol | 15.53 | 36.84 |
CDX77050 | Canola | peroxisome | 8.18 | 35.98 |
CDX77049 | Canola | peroxisome | 8.18 | 35.98 |
HORVU5Hr1G012890.5 | Barley | plastid | 15.26 | 33.64 |
GSMUA_Achr5P19790_001 | Banana | peroxisome | 1.66 | 24.49 |
Protein Annotations
MapMan:20.1.2.3 | Gene3D:3.40.30.10 | Gene3D:3.40.50.1820 | GO:A0A078GV27 | UniProt:A0A078GV27 | InterPro:AB_hydrolase |
InterPro:AB_hydrolase_1 | EnsemblPlants:CDY28994 | ProteinID:CDY28994 | ProteinID:CDY28994.1 | ncoils:Coil | InterPro:Epox_hydrolase-like |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 |
GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00041717001 | InterPro:IPR013766 | InterPro:IPR029058 | PFAM:PF00085 |
PFAM:PF12697 | PRINTS:PR00412 | PANTHER:PTHR21148 | PANTHER:PTHR21148:SF40 | SUPFAM:SSF52833 | SUPFAM:SSF53474 |
InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0004EF01AD | SEG:seg | : | : |
Description
BnaC07g32000DBnaC07g32000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GV27]
Coordinates
chrLK032229:-:86292..90955
Molecular Weight (calculated)
82291.0 Da
IEP (calculated)
9.704
GRAVY (calculated)
-0.515
Length
721 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFGAIRSIL RPLSRTLVSR VAASCSSAPL IPAAKPELCS FLGGSRLPWI PMANHFHSLS LTDTRLPKRR PMAHPKKKRF KLKPPGPYAY VQYTPGEPIA
101: SNNPNKGSVK RRNAKKRIGQ RRAFILSEKK KRQGLVQEAK RKKRIKEVER KMAKVARERA WEERLAELQR LEEEKKKSII MTTSLVREKK IKTNGIWLNV
201: AEKGDEGRPL VLLLHGFPET WFSWRHQIDY LSSHGYHVVA PDLRGYGDSE FLPSHESYTV SHLVADVIGW SLCLFRPDRV KGFISLSVPY SPRDPNLKPS
301: EFSKTFGDGL YITQFQKPGR AEAAFAKHDC KTVMKKFLLT TRTDFMVAPP GTEIIDDLVI PSEIPEWITE EEIQVYADKF QKSGFTGPLN YYRAMDLNWE
401: ILAPWEGSKI LVPTKFIAGG RDIGAKETME YVKGEMFKSI VPNVEVVVIE DGHHFIQQEK AKHVSEEILS FFNKLRTTEF EIEAFGVWAR KMDPDAVKST
501: LSNLAFGNVL AAAARDYKKE VLANEKAQSS NPVNEEVDLD ELMDDPELEK LHADRIAALK REVEKREAFK RQGHGEYREV SEGDFLGEVT RSQKVICHFY
601: HKEFYRCKIM DKHLKSLAPR HVDTKFIRVD AENAPFFVTK LAIKTLPCVL LFSKGVAIDR LVGFQDLGTK DDFTTTKLEN VLIKKGMLSK KKKEEDDEDA
701: EYQESVRRSV RSSENLDSDS D
101: SNNPNKGSVK RRNAKKRIGQ RRAFILSEKK KRQGLVQEAK RKKRIKEVER KMAKVARERA WEERLAELQR LEEEKKKSII MTTSLVREKK IKTNGIWLNV
201: AEKGDEGRPL VLLLHGFPET WFSWRHQIDY LSSHGYHVVA PDLRGYGDSE FLPSHESYTV SHLVADVIGW SLCLFRPDRV KGFISLSVPY SPRDPNLKPS
301: EFSKTFGDGL YITQFQKPGR AEAAFAKHDC KTVMKKFLLT TRTDFMVAPP GTEIIDDLVI PSEIPEWITE EEIQVYADKF QKSGFTGPLN YYRAMDLNWE
401: ILAPWEGSKI LVPTKFIAGG RDIGAKETME YVKGEMFKSI VPNVEVVVIE DGHHFIQQEK AKHVSEEILS FFNKLRTTEF EIEAFGVWAR KMDPDAVKST
501: LSNLAFGNVL AAAARDYKKE VLANEKAQSS NPVNEEVDLD ELMDDPELEK LHADRIAALK REVEKREAFK RQGHGEYREV SEGDFLGEVT RSQKVICHFY
601: HKEFYRCKIM DKHLKSLAPR HVDTKFIRVD AENAPFFVTK LAIKTLPCVL LFSKGVAIDR LVGFQDLGTK DDFTTTKLEN VLIKKGMLSK KKKEEDDEDA
701: EYQESVRRSV RSSENLDSDS D
001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
Arabidopsis Description
AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.