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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • cytosol 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90673 Canola cytosol 31.48 98.7
CDX90672 Canola mitochondrion 64.22 97.06
CDY33304 Canola peroxisome 35.37 78.7
CDY26530 Canola peroxisome 35.37 78.7
AT3G51000.1 Thale cress cytosol 34.4 76.78
CDX77971 Canola cytosol, peroxisome, plastid 33.15 73.77
CDX73754 Canola cytosol, peroxisome, plastid 15.81 66.67
KRH69845 Soybean cytosol 26.77 59.02
KRH08141 Soybean cytosol 26.63 58.72
VIT_04s0023g02610.t01 Wine grape golgi, mitochondrion, peroxisome 25.24 57.23
Os12t0636400-01 Rice cytosol, peroxisome 22.05 49.07
TraesCS5D01G065000.1 Wheat cytosol 22.05 48.77
OQU79732 Sorghum cytosol 21.36 47.68
Zm00001d041217_P002 Maize extracellular 21.36 47.53
Zm00001d031203_P001 Maize cytosol 21.64 47.42
EES17493 Sorghum cytosol 21.36 47.24
TraesCS6A01G029300.1 Wheat cytosol 21.36 47.09
TraesCS5A01G053600.1 Wheat cytosol 21.91 47.02
Zm00001d031204_P003 Maize cytosol 21.36 45.16
HORVU6Hr1G005400.4 Barley cytosol, peroxisome, plastid 21.91 43.53
CDY65636 Canola peroxisome 19.0 43.35
CDY50394 Canola peroxisome 18.86 43.04
CDY05187 Canola cytosol 20.25 42.94
CDY50393 Canola cytosol 14.7 42.57
CDY65635 Canola cytosol 18.45 42.22
CDX77051 Canola cytosol 9.57 42.07
CDY27752 Canola cytosol 19.69 41.76
CDY48181 Canola peroxisome 17.75 40.13
CDY09722 Canola cytosol 17.48 38.3
CDX90550 Canola cytosol 17.34 37.88
CDX90553 Canola cytosol 17.06 37.73
CDY09727 Canola cytosol 17.06 37.61
CDY57860 Canola cytosol 15.53 36.84
CDX77050 Canola peroxisome 8.18 35.98
CDX77049 Canola peroxisome 8.18 35.98
HORVU5Hr1G012890.5 Barley plastid 15.26 33.64
GSMUA_Achr5P19790_001 Banana peroxisome 1.66 24.49
Protein Annotations
MapMan:20.1.2.3Gene3D:3.40.30.10Gene3D:3.40.50.1820GO:A0A078GV27UniProt:A0A078GV27InterPro:AB_hydrolase
InterPro:AB_hydrolase_1EnsemblPlants:CDY28994ProteinID:CDY28994ProteinID:CDY28994.1ncoils:CoilInterPro:Epox_hydrolase-like
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0008150GO:GO:0009987
GO:GO:0019725GO:GO:0045454EnsemblPlantsGene:GSBRNA2T00041717001InterPro:IPR013766InterPro:IPR029058PFAM:PF00085
PFAM:PF12697PRINTS:PR00412PANTHER:PTHR21148PANTHER:PTHR21148:SF40SUPFAM:SSF52833SUPFAM:SSF53474
InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI0004EF01ADSEG:seg::
Description
BnaC07g32000DBnaC07g32000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GV27]
Coordinates
chrLK032229:-:86292..90955
Molecular Weight (calculated)
82291.0 Da
IEP (calculated)
9.704
GRAVY (calculated)
-0.515
Length
721 amino acids
Sequence
(BLAST)
001: MGFGAIRSIL RPLSRTLVSR VAASCSSAPL IPAAKPELCS FLGGSRLPWI PMANHFHSLS LTDTRLPKRR PMAHPKKKRF KLKPPGPYAY VQYTPGEPIA
101: SNNPNKGSVK RRNAKKRIGQ RRAFILSEKK KRQGLVQEAK RKKRIKEVER KMAKVARERA WEERLAELQR LEEEKKKSII MTTSLVREKK IKTNGIWLNV
201: AEKGDEGRPL VLLLHGFPET WFSWRHQIDY LSSHGYHVVA PDLRGYGDSE FLPSHESYTV SHLVADVIGW SLCLFRPDRV KGFISLSVPY SPRDPNLKPS
301: EFSKTFGDGL YITQFQKPGR AEAAFAKHDC KTVMKKFLLT TRTDFMVAPP GTEIIDDLVI PSEIPEWITE EEIQVYADKF QKSGFTGPLN YYRAMDLNWE
401: ILAPWEGSKI LVPTKFIAGG RDIGAKETME YVKGEMFKSI VPNVEVVVIE DGHHFIQQEK AKHVSEEILS FFNKLRTTEF EIEAFGVWAR KMDPDAVKST
501: LSNLAFGNVL AAAARDYKKE VLANEKAQSS NPVNEEVDLD ELMDDPELEK LHADRIAALK REVEKREAFK RQGHGEYREV SEGDFLGEVT RSQKVICHFY
601: HKEFYRCKIM DKHLKSLAPR HVDTKFIRVD AENAPFFVTK LAIKTLPCVL LFSKGVAIDR LVGFQDLGTK DDFTTTKLEN VLIKKGMLSK KKKEEDDEDA
701: EYQESVRRSV RSSENLDSDS D
Best Arabidopsis Sequence Match ( AT3G51000.1 )
(BLAST)
001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
Arabidopsis Description
AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.