Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77050 | Canola | peroxisome | 100.0 | 100.0 |
| CDY48181 | Canola | peroxisome | 98.17 | 50.47 |
| Bra034309.1-P | Field mustard | peroxisome | 97.56 | 50.16 |
| HORVU7Hr1G045620.2 | Barley | cytosol, mitochondrion, peroxisome | 41.46 | 44.16 |
| HORVU3Hr1G070830.1 | Barley | cytosol, peroxisome | 45.12 | 42.53 |
| AT2G26750.1 | Thale cress | cytosol | 78.66 | 40.31 |
| AT2G26740.1 | Thale cress | cytosol | 78.05 | 39.88 |
| CDY50393 | Canola | cytosol | 45.12 | 29.72 |
| CDY09722 | Canola | cytosol | 54.27 | 27.05 |
| CDX90550 | Canola | cytosol | 54.27 | 26.97 |
| CDY09727 | Canola | cytosol | 51.83 | 25.99 |
| CDX90553 | Canola | cytosol | 51.22 | 25.77 |
| CDY05187 | Canola | cytosol | 52.44 | 25.29 |
| CDY27752 | Canola | cytosol | 51.83 | 25.0 |
| CDY50394 | Canola | peroxisome | 48.17 | 25.0 |
| CDY65636 | Canola | peroxisome | 48.17 | 25.0 |
| TraesCS7B01G129100.1 | Wheat | cytosol | 48.78 | 24.84 |
| EES00506 | Sorghum | cytosol | 48.78 | 24.62 |
| TraesCS3B01G204900.1 | Wheat | peroxisome | 47.56 | 24.22 |
| TraesCS3D01G180600.1 | Wheat | peroxisome | 47.56 | 24.22 |
| Os05t0273800-01 | Rice | cytosol, peroxisome, plastid | 48.78 | 24.17 |
| TraesCS7D01G224000.1 | Wheat | unclear | 46.95 | 23.91 |
| TraesCS3A01G175200.2 | Wheat | peroxisome | 46.95 | 23.91 |
| TraesCS7D01G228900.1 | Wheat | cytosol | 44.51 | 23.7 |
| TraesCS7B01G128800.1 | Wheat | cytosol | 46.34 | 23.6 |
| Os01t0255000-01 | Rice | cytosol | 46.34 | 23.6 |
| TraesCS7A01G225600.1 | Wheat | cytosol | 46.34 | 23.6 |
| CDY65635 | Canola | cytosol | 45.12 | 23.49 |
| Os01t0255100-01 | Rice | cytosol | 46.34 | 23.46 |
| TraesCS7B01G128900.1 | Wheat | unclear | 45.73 | 23.29 |
| TraesCS7B01G194000.1 | Wheat | cytosol | 45.73 | 23.22 |
| HORVU7Hr1G045640.2 | Barley | plastid | 49.39 | 23.01 |
| TraesCS7D01G224200.1 | Wheat | golgi, unclear | 48.78 | 22.79 |
| Zm00001d040290_P001 | Maize | peroxisome | 49.39 | 22.75 |
| TraesCS7A01G222600.1 | Wheat | golgi, unclear | 48.17 | 22.44 |
| CDY57860 | Canola | cytosol | 41.46 | 22.37 |
| TraesCS7A01G222400.1 | Wheat | cytosol | 40.24 | 21.78 |
| EES17023 | Sorghum | extracellular, plastid, vacuole | 48.17 | 21.12 |
| Zm00001d023651_P001 | Maize | extracellular | 47.56 | 19.65 |
| CDY33304 | Canola | peroxisome | 37.8 | 19.14 |
| CDY26530 | Canola | peroxisome | 37.8 | 19.14 |
| HORVU3Hr1G035400.1 | Barley | plastid | 46.95 | 19.01 |
| CDX77971 | Canola | cytosol, peroxisome, plastid | 33.54 | 16.98 |
| GSMUA_Achr3P24120_001 | Banana | cytosol | 53.05 | 13.72 |
| CDX90672 | Canola | mitochondrion | 35.98 | 12.37 |
| CDY28994 | Canola | mitochondrion | 35.98 | 8.18 |
| HORVU3Hr1G070810.3 | Barley | cytosol, peroxisome | 3.66 | 5.83 |
| CDX77051 | Canola | cytosol | 2.44 | 2.44 |
| CDX73754 | Canola | cytosol, peroxisome, plastid | 1.83 | 1.75 |
| CDX90673 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX77049 | EnsemblPlantsGene:GSBRNA2T00127620001 | Gene3D:3.40.50.1820 | GO:A0A078CJK6 | GO:GO:0003674 | GO:GO:0003824 |
| InterPro:AB_hydrolase | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF13 | PRINTS:PR00412 |
| ProteinID:CDX77049 | ProteinID:CDX77049.1 | SEG:seg | SUPFAM:SSF53474 | UniParc:UPI0004EEB0CF | MapMan:35.2 |
Description
BnaC04g38440D
Coordinates
chrLK031809:-:704087..705445
Molecular Weight (calculated)
19018.7 Da
IEP (calculated)
4.800
GRAVY (calculated)
-0.366
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEVGEIEAE ISEVGVERVV RRILTYRTPR PLILPKDKSF WGPKDETIPL PSWLTEEDVA YYVSKFQEKG YTGGVNYYRN FDRNNELFAP WVGCKIQVPT
101: KFAIGEQDLV YHFPGAREYI HGPKFKEEVP LLEEPVVIEG AAHFVNQEKP QEILQLIVDF ISKF
101: KFAIGEQDLV YHFPGAREYI HGPKFKEEVP LLEEPVVIEG AAHFVNQEKP QEILQLIVDF ISKF
001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
Arabidopsis Description
ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.