Factsheet for TraesCS7D01G224200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, unclear
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G129100.1	Wheat	cytosol	89.74	97.83
TraesCS7A01G222600.1	Wheat	golgi, unclear	97.72	97.44
HORVU7Hr1G045640.2	Barley	plastid	95.16	94.89
TraesCS7D01G228900.1	Wheat	cytosol	75.21	85.71
TraesCS7D01G224000.1	Wheat	unclear	78.35	85.4
Os05t0273800-01	Rice	cytosol, peroxisome, plastid	72.65	77.04
EES17023	Sorghum	extracellular, plastid, vacuole	74.07	69.52
Zm00001d023651_P001	Maize	extracellular	76.35	67.51
GSMUA_Achr8P22510_001	Banana	peroxisome	50.43	64.84
CDX77051	Canola	cytosol	27.92	59.76
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	53.85	59.62
KRG96457	Soybean	nucleus	52.99	58.68
PGSC0003DMT400046206	Potato	peroxisome	52.71	58.18
TraesCS3D01G180600.1	Wheat	peroxisome	53.28	58.07
Solyc06g009170.2.1	Tomato	extracellular	52.42	57.86
VIT_05s0077g02020.t01	Wine grape	cytosol	52.14	57.73
PGSC0003DMT400063718	Potato	cytosol	51.57	57.64
KRH68486	Soybean	cytosol	51.85	57.59
VIT_07s0005g00700.t01	Wine grape	cytosol	51.85	57.41
VIT_14s0060g01940.t01	Wine grape	cytosol	51.57	57.1
Solyc05g054320.2.1	Tomato	cytosol	52.14	57.01
KRH50813	Soybean	cytosol	35.04	56.94
PGSC0003DMT400060250	Potato	cytosol	51.85	56.7
Solyc01g099910.2.1	Tomato	cytosol	50.71	56.69
Solyc05g054350.2.1	Tomato	plastid	51.57	56.39
PGSC0003DMT400060254	Potato	extracellular	51.57	56.39
KRG96773	Soybean	nucleus	50.71	56.33
KRG96774	Soybean	nucleus	51.0	56.29
VIT_05s0077g02010.t01	Wine grape	cytosol	50.71	56.15
KRG92916	Soybean	nucleus	51.28	55.9
AT2G26740.1	Thale cress	cytosol	51.0	55.76
PGSC0003DMT400011790	Potato	cytosol	51.0	55.42
Solyc12g099430.1.1	Tomato	cytosol	51.0	55.42
PGSC0003DMT400029422	Potato	cytosol	51.28	55.38
KRH68487	Soybean	cytosol	49.86	55.03
CDY48181	Canola	peroxisome	49.86	54.86
Bra034309.1-P	Field mustard	peroxisome	49.86	54.86
PGSC0003DMT400081311	Potato	cytosol	49.57	54.72
TraesCS5D01G507000.1	Wheat	peroxisome	51.85	54.65
AT2G26750.1	Thale cress	cytosol	49.57	54.38
Solyc01g066470.2.1	Tomato	cytosol, peroxisome	30.2	54.36
KRG96772	Soybean	nucleus	52.14	54.3
KRG96771	Soybean	nucleus	52.71	54.25
Solyc01g066460.2.1	Tomato	cytosol, peroxisome	29.91	53.85
KRH02278	Soybean	cytosol	54.13	53.67
Solyc09g075300.2.1	Tomato	cytosol	48.15	53.14
PGSC0003DMT400029420	Potato	cytosol	49.0	51.5
Solyc01g066450.2.1	Tomato	cytosol	49.0	51.34
KRH68206	Soybean	peroxisome	43.87	50.99
TraesCS5D01G065000.1	Wheat	cytosol	47.01	50.61
TraesCS5D01G507300.1	Wheat	cytosol, peroxisome, plastid	49.0	50.0
TraesCS3D01G545700.1	Wheat	cytosol, peroxisome, plastid	46.44	49.85
TraesCS3D01G074100.1	Wheat	cytosol, peroxisome, plasma membrane	45.01	48.92
CDX77049	Canola	peroxisome	22.79	48.78
CDX77050	Canola	peroxisome	22.79	48.78
TraesCS1D01G048000.1	Wheat	cytosol, peroxisome, plastid	45.87	48.06
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	25.64	47.12
VIT_05s0077g02030.t01	Wine grape	mitochondrion	11.68	43.62
TraesCS5D01G507100.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	23.65	43.01
TraesCS1D01G168400.1	Wheat	cytosol, peroxisome, plastid	33.62	37.94
TraesCS1D01G168300.4	Wheat	peroxisome	32.19	35.31
TraesCS2D01G529300.1	Wheat	peroxisome	30.77	35.18

Protein Annotations

EnsemblPlants:TraesCS7D01G224200.1	EnsemblPlantsGene:TraesCS7D01G224200	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF13	PFAM:PF00561
PRINTS:PR00111	PRINTS:PR00412	SEG:seg	SUPFAM:SSF53474	MapMan:35.2	:

Description

No Description!

Coordinates

chr7D:-:184863308..184865669

Molecular Weight (calculated)

38427.1 Da

IEP (calculated)

6.181

GRAVY (calculated)

-0.034

Length

351 amino acids

Sequence
(BLAST)

001: MIKACLSELC ASCCSCVLPP SSPRAADQEM ASDGAITHRS VDVNGVRLHV AEAGPAGAPA ALLLHGFPEV WYTWRHQMRA LAAAGYRAVA PDMRGYGGSD
101: APPGGPDQYT ALHVVGDLVA LIDSLGEKQV FVVAHDWGAM IAWSLCLFRP DRVKALVALS VPFSPRSPAR KPVDGLKALY GDEYYICRIQ EPGAIEAEFA
201: RLGTELVLRK FFTYRTPGPL FIPKSGWGSP DDEVPLPSWI TEEDIKYYAA QFDKSGFTGG LNYYRALNKT WELTSPWTGA EIKVPTKFIV GDVDLSYHVA
301: GAHDFINKGG LKKFVPLLDD VVVMKDVGHF INEEKPEEIS AHIISFIKKF D

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.