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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 2
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:peroxisome
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG96772 Soybean nucleus 91.46 85.76
KRG96774 Soybean nucleus 85.13 84.59
KRH68487 Soybean cytosol 83.23 82.7
KRG92916 Soybean nucleus 75.32 73.91
KRG96771 Soybean nucleus 79.11 73.31
KRH68486 Soybean cytosol 73.1 73.1
PGSC0003DMT400063718 Potato cytosol 65.51 65.92
Solyc01g099910.2.1 Tomato cytosol 65.19 65.61
VIT_14s0060g01940.t01 Wine grape cytosol 64.87 64.67
GSMUA_Achr8P10290_001 Banana cytosol 62.34 61.76
GSMUA_Achr3P08130_001 Banana cytosol 61.39 61.2
HORVU3Hr1G070810.3 Barley cytosol, peroxisome 19.94 61.16
KRG96457 Soybean nucleus 61.08 60.88
GSMUA_AchrUn_... Banana peroxisome 59.81 59.62
Bra039422.1-P Field mustard cytosol 61.71 58.91
CDY05187 Canola cytosol 62.97 58.53
AT3G05600.1 Thale cress cytosol 60.13 57.4
CDY27752 Canola cytosol 61.71 57.35
TraesCS7D01G228900.1 Wheat cytosol 55.38 56.82
TraesCS7A01G225600.1 Wheat cytosol 57.28 56.21
TraesCS7A01G222400.1 Wheat cytosol 53.8 56.11
TraesCS7B01G128900.1 Wheat unclear 56.96 55.9
TraesCS7B01G128800.1 Wheat cytosol 56.65 55.59
TraesCS7D01G224000.1 Wheat unclear 56.33 55.28
KRH68206 Soybean peroxisome 52.53 54.97
TraesCS7B01G194000.1 Wheat cytosol 56.01 54.8
TraesCS7B01G129100.1 Wheat cytosol 55.7 54.66
KRH50813 Soybean cytosol 37.34 54.63
TraesCS3B01G204900.1 Wheat peroxisome 55.38 54.35
TraesCS3D01G180600.1 Wheat peroxisome 55.38 54.35
Os05t0273800-01 Rice cytosol, peroxisome, plastid 56.33 53.78
Os01t0255000-01 Rice cytosol 54.75 53.73
TraesCS3A01G175200.2 Wheat peroxisome 54.75 53.73
GSMUA_Achr8P22510_001 Banana peroxisome 46.2 53.48
KRH02278 Soybean cytosol 59.81 53.39
EES00506 Sorghum cytosol 54.75 53.23
Os01t0255100-01 Rice cytosol 54.11 52.78
KRG92918 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 18.35 52.73
HORVU7Hr1G045640.2 Barley plastid 57.28 51.42
TraesCS7A01G222600.1 Wheat golgi, unclear 56.65 50.85
TraesCS7D01G224200.1 Wheat golgi, unclear 56.33 50.71
HORVU3Hr1G070830.1 Barley cytosol, peroxisome 25.95 47.13
EES17023 Sorghum extracellular, plastid, vacuole 55.38 46.79
KRH69845 Soybean cytosol 47.15 45.57
HORVU7Hr1G045620.2 Barley cytosol, mitochondrion, peroxisome 21.84 44.81
KRH08141 Soybean cytosol 44.94 43.43
HORVU3Hr1G035400.1 Barley plastid 54.75 42.72
KRH22405 Soybean cytoskeleton, cytosol, peroxisome 35.76 36.33
KRH25591 Soybean cytosol 36.08 36.31
KRH55994 Soybean cytosol 34.81 35.03
KRH26931 Soybean cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 30.38 34.41
KRH55995 Soybean nucleus 34.18 34.29
KRH20490 Soybean cytosol 32.91 33.44
KRH20488 Soybean peroxisome 35.13 33.23
KRH25546 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 34.49 32.15
GSMUA_Achr3P24120_001 Banana cytosol 63.61 31.7
KRG94755 Soybean cytosol, peroxisome, plastid 26.9 29.21
KRH37569 Soybean cytosol 14.87 25.97
KRH25547 Soybean cytosol 10.76 22.67
KRH25548 Soybean cytosol 12.34 22.16
Protein Annotations
EMBL:ACUP02012162EnsemblPlants:KRG96773EnsemblPlantsGene:GLYMA_19G231900Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824
GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_1InterPro:Epox_hydrolase-likeInterPro:IPR029058PANTHER:PTHR43329
PANTHER:PTHR43329:SF20PFAM:PF00561PRINTS:PR00412ProteinID:KRG96773ProteinID:KRG96773.1SUPFAM:SSF53474
UniParc:UPI0006ED81A7UniProt:A0A0R0ESZ9MapMan:35.2:::
Description
hypothetical protein
Coordinates
chr19:+:48228252..48229971
Molecular Weight (calculated)
36120.3 Da
IEP (calculated)
5.386
GRAVY (calculated)
-0.230
Length
316 amino acids
Sequence
(BLAST)
001: MEQIKHRTVE VNGIKMHVAE KGEGPVVLFL HGFPELWYSW RHQILSLSSL GYRAVAPDLR GYGDTEAPPS ISSYNCFHIV GDLVALIDSL GVQQVFLVAH
101: DWGAIIGWYL CMFRPDKVKA YVCLSVPLLR RDPNIRTVDG MRALYGDDYY VCRFQKPGEM EAQMAEVGTE YVLENILTTR NPGPPILPKG RFQFNPEMPN
201: TLPSWLTEED LAYYVSKFEK TGFTGPLNYY RNFNLNWELT APWTGGQIKV PVKYITGELD MVYNSLNLKE YIHGGGFKQD VPNLEQVIVQ KGVAHFNNQE
301: AAEEIDNYIY DFINKF
Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)
001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
Arabidopsis Description
ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.