CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 2
peroxisome 2
plastid 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g00100.t01	Wine grape	cytosol, mitochondrion, plastid, vacuole	24.55	23.48
KRH50813	Soybean	cytosol	40.91	20.83
KRH68486	Soybean	cytosol	52.73	18.35
KRG96773	Soybean	nucleus	52.73	18.35
KRG96774	Soybean	nucleus	52.73	18.24
KRH68487	Soybean	cytosol	51.82	17.92
KRG96772	Soybean	nucleus	52.73	17.21
KRG92916	Soybean	nucleus	50.0	17.08
KRG96771	Soybean	nucleus	52.73	17.01
KRG96457	Soybean	nucleus	47.27	16.4
KRH68206	Soybean	peroxisome	44.55	16.23
KRH02278	Soybean	cytosol	49.09	15.25
KRH69845	Soybean	cytosol	40.91	13.76
KRH55995	Soybean	nucleus	38.18	13.33
KRH08141	Soybean	cytosol	39.09	13.15
KRH25591	Soybean	cytosol	37.27	13.06
KRH20490	Soybean	cytosol	36.36	12.86
KRH55994	Soybean	cytosol	35.45	12.42
KRH25546	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	38.18	12.39
KRH20488	Soybean	peroxisome	37.27	12.28
KRH22405	Soybean	cytoskeleton, cytosol, peroxisome	34.55	12.22
KRH26931	Soybean	cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	29.09	11.47
KRG94755	Soybean	cytosol, peroxisome, plastid	29.09	11.0
KRH25547	Soybean	cytosol	5.45	4.0
KRH25548	Soybean	cytosol	5.45	3.41
KRH37569	Soybean	cytosol	5.45	3.31

Protein Annotations

EMBL:ACUP02012770	EnsemblPlants:KRG92918	EnsemblPlantsGene:GLYMA_20G237700	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43689	PANTHER:PTHR43689:SF5
PFAM:PF12697	PRINTS:PR00412	ProteinID:KRG92918	ProteinID:KRG92918.1	SUPFAM:SSF53474	UniParc:UPI0002966F63
UniProt:K7N5A5	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:46945046..46945776

Molecular Weight (calculated)

12649.2 Da

IEP (calculated)

8.641

GRAVY (calculated)

-0.295

Length

110 amino acids

Sequence
(BLAST)

001: MHFAEKGEGP VVLFLHGFPD LWYCWRNQIL NLSELGYHAV APDLRGYGDT QVLGHDHDKA SRYTVLELVE STKCRLSSLQ VTLACYTHSR QRRTISSTVV
101: SSKMCHLWRK

Best Arabidopsis Sequence Match ( AT3G05600.1 )
(BLAST)

001: MEGIDHRMVS VNGITMHIAE KGPKEGPVVL LLHGFPDLWY TWRHQISGLS SLGYRAVAPD LRGYGDSDSP ESFSEYTCLN VVGDLVALLD SVAGNQEKVF
101: LVGHDWGAII GWFLCLFRPE KINGFVCLSV PYRSRNPKVK PVQGFKAVFG DDYYICRFQE PGKIEGEIAS ADPRIFLRNL FTGRTLGPPI LPKDNPFGEK
201: PNPNSENIEL PEWFSKKDLD FYVSKFEKAG FTGGLNYYRA MDLNWELTAP WTGAKIQVPV KFMTGDFDMV YTTPGMKEYI HGGGFAADVP TLQEIVVIED
301: AGHFVNQEKP QEVTAHINDF FTKLRDNNKS F

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.