Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid, vacuole, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- vacuole 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0021g02470.t01 | Wine grape | cytosol | 75.65 | 27.44 |
| KRG92918 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 23.48 | 24.55 |
| VIT_04s0023g02610.t01 | Wine grape | golgi, mitochondrion, peroxisome | 54.78 | 19.81 |
| VIT_05s0077g02010.t01 | Wine grape | cytosol | 51.3 | 18.61 |
| VIT_05s0077g02020.t01 | Wine grape | cytosol | 51.3 | 18.61 |
| VIT_07s0005g00700.t01 | Wine grape | cytosol | 48.7 | 17.67 |
| VIT_05s0077g01990.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 46.96 | 17.03 |
| VIT_14s0060g01940.t01 | Wine grape | cytosol | 46.96 | 17.03 |
| VIT_00s0370g00070.t01 | Wine grape | cytosol, peroxisome, plastid | 39.13 | 14.52 |
| VIT_12s0059g00220.t01 | Wine grape | peroxisome | 38.26 | 14.06 |
| VIT_12s0059g00210.t01 | Wine grape | peroxisome | 37.39 | 13.74 |
| VIT_12s0059g00230.t01 | Wine grape | cytosol, peroxisome, vacuole | 37.39 | 13.74 |
| VIT_00s0370g00060.t01 | Wine grape | peroxisome, plasma membrane, plastid | 34.78 | 12.86 |
| VIT_05s0077g02030.t01 | Wine grape | mitochondrion | 6.09 | 7.45 |
| VIT_03s0038g00090.t01 | Wine grape | cytosol | 2.61 | 2.38 |
| VIT_05s0077g02000.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 3.48 | 2.09 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | ProteinID:CCB60724 | ProteinID:CCB60724.1 |
| InterPro:Epox_hydrolase-like | UniProt:F6I1A8 | EMBL:FN596508 | GO:GO:0003674 | GO:GO:0003824 | InterPro:IPR029058 |
| PFAM:PF00561 | PRINTS:PR00412 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF5 | SUPFAM:SSF53474 | UniParc:UPI000210AA88 |
| ArrayExpress:VIT_03s0038g00100 | EnsemblPlantsGene:VIT_03s0038g00100 | EnsemblPlants:VIT_03s0038g00100.t01 | : | : | : |
Description
No Description!
Coordinates
chr3:-:76147..76494
Molecular Weight (calculated)
13442.4 Da
IEP (calculated)
9.628
GRAVY (calculated)
-0.124
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGITHRRIR TYGIWIHVAE LGKLPLVLLI HGFPKLWSSW NYQMTHLAKH GYRVVAPDMR GYRDFDSPPD LASYTTLHLV GDLIGLLDQL GEEKVVHLLY
101: WKNLFYHLLR SSSTR
101: WKNLFYHLLR SSSTR
001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
Arabidopsis Description
AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.