CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 2
peroxisome 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68486	Soybean	cytosol	75.16	76.58
KRG96774	Soybean	nucleus	75.16	76.1
KRG96773	Soybean	nucleus	73.91	75.32
KRH68487	Soybean	cytosol	72.36	73.27
KRG96772	Soybean	nucleus	76.4	73.0
KRG96771	Soybean	nucleus	75.78	71.55
PGSC0003DMT400063718	Potato	cytosol	65.84	67.52
Solyc01g099910.2.1	Tomato	cytosol	65.53	67.2
VIT_14s0060g01940.t01	Wine grape	cytosol	63.35	64.35
Bra039422.1-P	Field mustard	cytosol	64.29	62.54
GSMUA_Achr8P10290_001	Banana	cytosol	61.18	61.76
GSMUA_Achr3P08130_001	Banana	cytosol	60.56	61.51
CDY05187	Canola	cytosol	64.91	61.47
CDY27752	Canola	cytosol	64.29	60.88
AT3G05600.1	Thale cress	cytosol	62.42	60.73
HORVU3Hr1G070810.3	Barley	cytosol, peroxisome	19.25	60.19
GSMUA_AchrUn_...	Banana	peroxisome	58.7	59.62
KRG96457	Soybean	nucleus	58.07	58.99
TraesCS7A01G222400.1	Wheat	cytosol	54.04	57.43
KRH50813	Soybean	cytosol	38.51	57.41
TraesCS7D01G228900.1	Wheat	cytosol	54.35	56.82
TraesCS7B01G128800.1	Wheat	cytosol	56.21	56.21
TraesCS7B01G128900.1	Wheat	unclear	56.21	56.21
TraesCS7D01G224000.1	Wheat	unclear	56.21	56.21
TraesCS7A01G225600.1	Wheat	cytosol	55.9	55.9
KRH02278	Soybean	cytosol	61.18	55.65
TraesCS7B01G129100.1	Wheat	cytosol	55.59	55.59
Os01t0255000-01	Rice	cytosol	54.97	54.97
Os05t0273800-01	Rice	cytosol, peroxisome, plastid	55.59	54.08
TraesCS7B01G194000.1	Wheat	cytosol	54.04	53.87
Os01t0255100-01	Rice	cytosol	54.04	53.7
KRH68206	Soybean	peroxisome	50.31	53.64
GSMUA_Achr8P22510_001	Banana	peroxisome	45.03	53.11
TraesCS3D01G180600.1	Wheat	peroxisome	53.11	53.11
TraesCS3B01G204900.1	Wheat	peroxisome	53.11	53.11
EES00506	Sorghum	cytosol	53.42	52.92
TraesCS3A01G175200.2	Wheat	peroxisome	52.8	52.8
HORVU7Hr1G045640.2	Barley	plastid	57.45	52.56
TraesCS7D01G224200.1	Wheat	golgi, unclear	55.9	51.28
TraesCS7A01G222600.1	Wheat	golgi, unclear	55.59	50.85
KRG92918	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	17.08	50.0
KRH69845	Soybean	cytosol	48.45	47.71
EES17023	Sorghum	extracellular, plastid, vacuole	54.35	46.79
HORVU3Hr1G070830.1	Barley	cytosol, peroxisome	25.16	46.55
KRH08141	Soybean	cytosol	46.27	45.57
HORVU7Hr1G045620.2	Barley	cytosol, mitochondrion, peroxisome	21.74	45.45
HORVU3Hr1G035400.1	Barley	plastid	53.42	42.47
KRH25591	Soybean	cytosol	36.96	37.9
KRH55994	Soybean	cytosol	35.71	36.62
KRH55995	Soybean	nucleus	35.4	36.19
KRH22405	Soybean	cytoskeleton, cytosol, peroxisome	34.78	36.01
KRH25546	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	36.34	34.51
KRH20490	Soybean	cytosol	33.23	34.41
KRH26931	Soybean	cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	29.5	34.05
KRH20488	Soybean	peroxisome	34.47	33.23
GSMUA_Achr3P24120_001	Banana	cytosol	59.94	30.44
KRG94755	Soybean	cytosol, peroxisome, plastid	25.16	27.84
KRH25547	Soybean	cytosol	12.42	26.67
KRH25548	Soybean	cytosol	13.66	25.0
KRH37569	Soybean	cytosol	13.35	23.76

Protein Annotations

EMBL:ACUP02012770	EnsemblPlants:KRG92916	EnsemblPlantsGene:GLYMA_20G237500	EntrezGene:100791126	Gene3D:3.40.50.1820	GO:GO:0003674
GO:GO:0003824	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329
PANTHER:PTHR43329:SF20	PFAM:PF00561	PRINTS:PR00412	ProteinID:KRG92916	ProteinID:KRG92916.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI000233DDCF	UniProt:I1NJ31	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr20:-:46936383..46937704

Molecular Weight (calculated)

36281.2 Da

IEP (calculated)

5.787

GRAVY (calculated)

-0.157

Length

322 amino acids

Sequence
(BLAST)

001: MESIEHRTVE VNGIKMHVAE KGEGAVVLFL HGFPELWYSW RHQILALSSL GYRAVAPDLR GYGDTEAPST VNSYTCFHLV GDIIALIDSL GVDKVFLVAH
101: DWGAIIGWYL CLFRPDRIKA YVCLSVPFRP FLGRNPKQKT VDFFHSLYGD DYYICRFQEP GKMEAEMAGV DTAYLMKNIL TTRKTGPPTF PKGEYGTGFN
201: PVTPDTLPSW ISQEDLDYYV TKFNKTGFSG GLNYYRNLNL NWELTAPWTG AGIVDVPVKF ITGGVDLVYT SPGMKEYIHN GGFKKDVPTL EEVVVQEGVA
301: HFNNQEAAED VSNHIYDFIK KF

Best Arabidopsis Sequence Match ( AT3G05600.1 )
(BLAST)

001: MEGIDHRMVS VNGITMHIAE KGPKEGPVVL LLHGFPDLWY TWRHQISGLS SLGYRAVAPD LRGYGDSDSP ESFSEYTCLN VVGDLVALLD SVAGNQEKVF
101: LVGHDWGAII GWFLCLFRPE KINGFVCLSV PYRSRNPKVK PVQGFKAVFG DDYYICRFQE PGKIEGEIAS ADPRIFLRNL FTGRTLGPPI LPKDNPFGEK
201: PNPNSENIEL PEWFSKKDLD FYVSKFEKAG FTGGLNYYRA MDLNWELTAP WTGAKIQVPV KFMTGDFDMV YTTPGMKEYI HGGGFAADVP TLQEIVVIED
301: AGHFVNQEKP QEVTAHINDF FTKLRDNNKS F

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.