CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040290_P001	Maize	peroxisome	94.15	85.96
TraesCS3D01G180600.1	Wheat	peroxisome	83.69	84.47
TraesCS3B01G204900.1	Wheat	peroxisome	83.69	84.47
TraesCS3A01G175200.2	Wheat	peroxisome	82.46	83.23
Os01t0255000-01	Rice	cytosol	75.38	76.09
Os01t0255100-01	Rice	cytosol	74.46	74.69
HORVU3Hr1G035400.1	Barley	plastid	83.69	67.16
Solyc06g009170.2.1	Tomato	extracellular	58.77	60.06
PGSC0003DMT400046206	Potato	peroxisome	58.77	60.06
CDX77051	Canola	cytosol	29.85	59.15
KRG96457	Soybean	nucleus	57.54	58.99
VIT_05s0077g02010.t01	Wine grape	cytosol	56.92	58.36
PGSC0003DMT400063718	Potato	cytosol	56.0	57.96
VIT_07s0005g00700.t01	Wine grape	cytosol	56.31	57.73
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	56.0	57.41
Solyc01g099910.2.1	Tomato	cytosol	54.77	56.69
EER90578	Sorghum	cytosol, peroxisome, plastid	29.23	56.21
VIT_05s0077g02020.t01	Wine grape	cytosol	54.77	56.15
KRH50813	Soybean	cytosol	36.92	55.56
PGSC0003DMT400029422	Potato	cytosol	55.38	55.38
KRH68486	Soybean	cytosol	53.85	55.38
CDY48181	Canola	peroxisome	54.15	55.17
Bra034309.1-P	Field mustard	peroxisome	54.15	55.17
VIT_14s0060g01940.t01	Wine grape	cytosol	53.54	54.89
KRH02278	Soybean	cytosol	59.69	54.8
KRG96773	Soybean	nucleus	53.23	54.75
PGSC0003DMT400060254	Potato	extracellular	53.85	54.52
Solyc05g054320.2.1	Tomato	cytosol	53.85	54.52
AT2G26740.1	Thale cress	cytosol	53.85	54.52
AT2G26750.1	Thale cress	cytosol	53.54	54.38
Solyc05g054350.2.1	Tomato	plastid	53.54	54.21
PGSC0003DMT400029420	Potato	cytosol	55.69	54.19
Solyc12g099430.1.1	Tomato	cytosol	53.85	54.18
PGSC0003DMT400011790	Potato	cytosol	53.85	54.18
KRG96774	Soybean	nucleus	52.92	54.09
PGSC0003DMT400081311	Potato	cytosol	52.62	53.77
Solyc09g075300.2.1	Tomato	cytosol	52.31	53.46
KRG92916	Soybean	nucleus	52.92	53.42
KRG96771	Soybean	nucleus	56.0	53.37
PGSC0003DMT400060250	Potato	cytosol	52.62	53.27
Solyc01g066460.2.1	Tomato	cytosol, peroxisome	31.69	52.82
Solyc01g066450.2.1	Tomato	cytosol	54.15	52.54
Solyc01g066470.2.1	Tomato	cytosol, peroxisome	31.38	52.31
KRH68487	Soybean	cytosol	51.08	52.2
KRH68206	Soybean	peroxisome	48.31	51.99
KRG96772	Soybean	nucleus	53.85	51.93
EES17023	Sorghum	extracellular, plastid, vacuole	59.38	51.6
OQU79732	Sorghum	cytosol	51.08	51.39
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	29.85	50.79
EER96138	Sorghum	cytosol, peroxisome, plastid	50.15	50.15
EES10243	Sorghum	cytosol, peroxisome, plastid	48.62	48.92
CDX77049	Canola	peroxisome	24.62	48.78
CDX77050	Canola	peroxisome	24.62	48.78
EES17493	Sorghum	cytosol	48.31	48.16
VIT_05s0077g02030.t01	Wine grape	mitochondrion	13.54	46.81
OQU90681	Sorghum	peroxisome	57.23	45.15
EES05333	Sorghum	cytosol, golgi, peroxisome	32.92	34.08
EES09308	Sorghum	cytosol, peroxisome, plastid	32.0	32.91
EER94004	Sorghum	cytosol	31.38	32.38
OQU91562	Sorghum	cytosol	31.08	31.46

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	EntrezGene:8072419	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	UniProt:C5XFU9
EnsemblPlants:EES00506	ProteinID:EES00506	ProteinID:EES00506.1	InterPro:Epox_hydrolase-like	GO:GO:0003674	GO:GO:0003824
InterPro:IPR029058	PFAM:PF12697	PRINTS:PR00412	PANTHER:PTHR43329	PANTHER:PTHR43329:SF14	EnsemblPlantsGene:SORBI_3003G116700
SUPFAM:SSF53474	unigene:Sbi.3400	UniParc:UPI0001A849D8	RefSeq:XP_002455386.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:10525457..10529659

Molecular Weight (calculated)

36150.0 Da

IEP (calculated)

5.761

GRAVY (calculated)

-0.154

Length

325 amino acids

Sequence
(BLAST)

001: MAATVEGVRH RTVEANGVRL HVAEAGPEEA GAPVVLLVHG FPDLWYGWRH QMAALAARGY RAVAPDLRGY GDSDSPPDAS SYTTFHVVGD LVALISDLGQ
101: PRVFVVGHDW GAIVAWQLCL LRPDLVRALV NLSVVYHPRR PEMSPLQTIR AACGEDHYMC RFQEPGVAEA EFALYDTKYV FKKTFGMRKP APLVLPKDKS
201: FFDSLDSDGT CPPWLSEEDI SYYAEKFAKT GFTGGLNYYR CMDRSWELSA PWTGAQIKVP SKFIVGDLDI TYNAPGVPDY IHKGGFKASV PNLEDVVIME
301: GVSHFLNQEK PNEVSDHICE FFSKF

Best Arabidopsis Sequence Match ( AT4G02340.1 )
(BLAST)

001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL

Arabidopsis Description

AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.