CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96138	Sorghum	cytosol, peroxisome, plastid	84.21	83.69
TraesCS3A01G255200.1	Wheat	peroxisome	77.4	78.37
TraesCS3B01G088600.1	Wheat	cytosol, peroxisome, plasma membrane	75.54	75.54
TraesCS3D01G074100.1	Wheat	cytosol, peroxisome, plasma membrane	75.23	75.23
EER90578	Sorghum	cytosol, peroxisome, plastid	26.93	51.48
EES00506	Sorghum	cytosol	48.92	48.62
OQU90681	Sorghum	peroxisome	56.35	44.17
EES17493	Sorghum	cytosol	44.27	43.87
OQU79732	Sorghum	cytosol	42.72	42.72
EES17023	Sorghum	extracellular, plastid, vacuole	44.89	38.77
EES05333	Sorghum	cytosol, golgi, peroxisome	33.44	34.39
OQU91562	Sorghum	cytosol	33.75	33.96
EER94004	Sorghum	cytosol	31.58	32.38
EES09308	Sorghum	cytosol, peroxisome, plastid	30.65	31.33

Protein Annotations

EnsemblPlants:EES10243	EnsemblPlantsGene:SORBI_3005G213700	EntrezGene:8082099	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF8
PFAM:PF00561	PRINTS:PR00111	PRINTS:PR00412	ProteinID:EES10243	ProteinID:EES10243.1	RefSeq:XP_002451255.1
SEG:seg	SUPFAM:SSF53474	UniParc:UPI0001A869F5	UniProt:C5Y7X0	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr5:-:69990063..69991851

Molecular Weight (calculated)

35643.8 Da

IEP (calculated)

7.011

GRAVY (calculated)

-0.049

Length

323 amino acids

Sequence
(BLAST)

001: MATATASKGV THRTLEVNGI KIHVAEAGDG GSTGGTVLFL HGFLELWHSW QHPLLSLSSR GYRCVAPDLR GYGDSSSPPS PSSYTIFHLV GDVVGVLDAL
101: SLPRAFVVGQ GTGAVLAWHL ATVRPDRVRA LVNMSSAFMP RNPGVRPLQA FRRLFGDGYY LLRLQEPGAM EAEFAVMDTR FIFRKLLTTR ELGAISLSPE
201: WWGPPDQDIP LPPWLTEEFV HLLAAKFDET GFAGAMNSFR CLDLNWELTA PWTGAKVTVP TKYIAGEDAM SYHRVKEYIH KGGLKRDVPG LEEVAVIAGA
301: GHYVHLEKAE EVTEHIYQFI KKF

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.