CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013934_P001	Maize	extracellular	90.48	90.48
EES05333	Sorghum	cytosol, golgi, peroxisome	86.67	86.94
OQU91562	Sorghum	cytosol	87.94	86.29
EES09308	Sorghum	cytosol, peroxisome, plastid	73.97	73.73
TraesCS2B01G556900.1	Wheat	peroxisome	72.06	72.76
TraesCS2D01G529300.1	Wheat	peroxisome	70.48	72.31
HORVU2Hr1G116250.4	Barley	peroxisome	61.9	67.24
GSMUA_Achr8P14130_001	Banana	cytosol	63.81	62.23
KRH22405	Soybean	cytoskeleton, cytosol, peroxisome	56.83	57.56
VIT_12s0059g00210.t01	Wine grape	peroxisome	56.83	57.19
VIT_12s0059g00230.t01	Wine grape	cytosol, peroxisome, vacuole	56.83	57.19
KRH55995	Soybean	nucleus	56.83	56.83
KRH25591	Soybean	cytosol	56.19	56.37
KRH55994	Soybean	cytosol	56.19	56.37
TraesCS2A01G526600.1	Wheat	plastid	41.27	56.28
VIT_12s0059g00220.t01	Wine grape	peroxisome	55.87	56.23
PGSC0003DMT400055784	Potato	cytosol, peroxisome, plastid	54.29	54.98
KRH26931	Soybean	cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	48.25	54.48
Solyc02g078570.2.1	Tomato	extracellular	53.33	53.33
KRH25546	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	57.14	53.1
KRH25547	Soybean	cytosol	22.86	48.0
KRH37569	Soybean	cytosol	27.3	47.51
KRH25548	Soybean	cytosol	24.44	43.75
KRG94755	Soybean	cytosol, peroxisome, plastid	38.73	41.92
Os10t0498100-01	Rice	vacuole	39.37	40.13
EER90578	Sorghum	cytosol, peroxisome, plastid	20.0	37.28
OQU79732	Sorghum	cytosol	37.78	36.84
EES17493	Sorghum	cytosol	37.46	36.2
EER96138	Sorghum	cytosol, peroxisome, plastid	33.33	32.31
EES10243	Sorghum	cytosol, peroxisome, plastid	32.38	31.58
EES00506	Sorghum	cytosol	32.38	31.38
EES17023	Sorghum	extracellular, plastid, vacuole	34.92	29.41
OQU90681	Sorghum	peroxisome	32.7	25.0

Protein Annotations

EnsemblPlants:EER94004	EnsemblPlantsGene:SORBI_3001G205700	EntrezGene:8065806	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF19
PFAM:PF00561	PRINTS:PR00111	PRINTS:PR00412	ProteinID:EER94004	ProteinID:EER94004.1	RefSeq:XP_002467006.1
SEG:seg	SUPFAM:SSF53474	UniParc:UPI0001A82860	UniProt:C5WXA4	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:-:18792767..18794927

Molecular Weight (calculated)

35177.4 Da

IEP (calculated)

4.963

GRAVY (calculated)

-0.064

Length

315 amino acids

Sequence
(BLAST)

001: MALEIEHTHL PIRGLNLHVA HVGKGDLGTV VFLHGFPEIW YSWRHQMRAV AAAGYLAIAP DCRGYGLSDQ PPEDEEASLD DLVADVLGIL DALSVPKAFL
101: VGKDFGAMPA YEFALQHPDR TRGVVCLGIP FSPVPMSLDA MPEGLYIRRW REPGGRAEAD FGRFDVRRVV RTVYVLFSGA DIPIAKEGQE VMDLADLSTP
201: LPAWFTEEDL DAYAKLYEKS GFGYPLKMPY RAIHKIPNRL DAKFQVPVFM VMGEKDYCFK FPGFETAMRS GVMNNFMPDL KITYIPEGSH FVQEQLPEQV
301: NDLLLGFLSD HPSAA

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.