Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51000.1 | EES00506 | AT2G26740.1 | 21798944 |
| AT3G51000.1 | EES17023 | AT2G26740.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031203_P001 | Maize | cytosol | 90.49 | 89.67 |
| OQU79732 | Sorghum | cytosol | 73.93 | 74.61 |
| TraesCS5D01G065000.1 | Wheat | cytosol | 74.54 | 74.54 |
| Os12t0636400-01 | Rice | cytosol, peroxisome | 72.7 | 73.15 |
| TraesCS5A01G053600.1 | Wheat | cytosol | 73.01 | 70.83 |
| TraesCS6A01G029300.1 | Wheat | cytosol | 70.86 | 70.64 |
| HORVU6Hr1G005400.4 | Barley | cytosol, peroxisome, plastid | 72.09 | 64.74 |
| EER90578 | Sorghum | cytosol, peroxisome, plastid | 28.83 | 55.62 |
| VIT_15s0021g02470.t01 | Wine grape | cytosol | 53.99 | 55.52 |
| VIT_04s0023g02610.t01 | Wine grape | golgi, mitochondrion, peroxisome | 51.23 | 52.52 |
| AT3G51000.1 | Thale cress | cytosol | 51.23 | 51.7 |
| KRH69845 | Soybean | cytosol | 51.23 | 51.07 |
| CDY33304 | Canola | peroxisome | 50.31 | 50.62 |
| CDY26530 | Canola | peroxisome | 50.31 | 50.62 |
| KRH08141 | Soybean | cytosol | 50.61 | 50.46 |
| GSMUA_Achr5P19770_001 | Banana | cytosol | 15.95 | 50.0 |
| Bra038876.1-P | Field mustard | peroxisome | 50.0 | 49.85 |
| Bra036841.1-P | Field mustard | peroxisome | 48.77 | 49.84 |
| CDX77971 | Canola | cytosol, peroxisome, plastid | 49.08 | 49.38 |
| VIT_03s0038g00090.t01 | Wine grape | cytosol | 19.02 | 49.21 |
| EES00506 | Sorghum | cytosol | 48.16 | 48.31 |
| CDX73754 | Canola | cytosol, peroxisome, plastid | 24.85 | 47.37 |
| HORVU5Hr1G012890.5 | Barley | plastid | 45.09 | 44.95 |
| EER96138 | Sorghum | cytosol, peroxisome, plastid | 44.79 | 44.92 |
| EES10243 | Sorghum | cytosol, peroxisome, plastid | 43.87 | 44.27 |
| EES17023 | Sorghum | extracellular, plastid, vacuole | 45.71 | 39.84 |
| EER94004 | Sorghum | cytosol | 36.2 | 37.46 |
| EES05333 | Sorghum | cytosol, golgi, peroxisome | 35.89 | 37.26 |
| OQU90681 | Sorghum | peroxisome | 46.93 | 37.14 |
| OQU91562 | Sorghum | cytosol | 36.2 | 36.76 |
| EES09308 | Sorghum | cytosol, peroxisome, plastid | 35.28 | 36.39 |
| CDX90672 | Canola | mitochondrion | 46.63 | 31.87 |
| CDY28994 | Canola | mitochondrion | 47.24 | 21.36 |
| CDX90673 | Canola | cytosol | 0.31 | 0.43 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:8071538 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | UniProt:C5YT11 |
| EnsemblPlants:EES17493 | ProteinID:EES17493 | ProteinID:EES17493.1 | InterPro:Epox_hydrolase-like | GO:GO:0003674 | GO:GO:0003824 |
| InterPro:IPR029058 | PFAM:PF00561 | PRINTS:PR00111 | PRINTS:PR00412 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF5 |
| EnsemblPlantsGene:SORBI_3008G189100 | SUPFAM:SSF53474 | unigene:Sbi.17861 | UniParc:UPI0001A88B9C | RefSeq:XP_002443655.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:-:62332498..62335855
Molecular Weight (calculated)
36210.2 Da
IEP (calculated)
4.972
GRAVY (calculated)
-0.054
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEADAEVR HWTADVNGIS LHVAERGPAD GPAVLLIHGF PELWLSWRHQ MAALAARGFR ALAPDLRGYG DSSVPTDPAA YSILHIVGDL VALLDHLQLT
101: KVFVVGHDWG AQVAWHLCLF RPDRVRAAVV LGIPYFPRGS RPLTDRFVPL GDGYYINQFL EPGRTERAFA RYDVATVLKK FYAMEIDEIL APPGVEIIDF
201: LQAPSSPIPW MTDEELGQFA EKFEKTGFTG PLNYYRMLVT NWRLTAPWSG SKITVPAKFI LSKNDVGLQS FGTEEYVKSG GLKENVPDLE VSIIEGHHFV
301: QQEEAESVNS EILSFLNKFA TEGGSA
101: KVFVVGHDWG AQVAWHLCLF RPDRVRAAVV LGIPYFPRGS RPLTDRFVPL GDGYYINQFL EPGRTERAFA RYDVATVLKK FYAMEIDEIL APPGVEIIDF
201: LQAPSSPIPW MTDEELGQFA EKFEKTGFTG PLNYYRMLVT NWRLTAPWSG SKITVPAKFI LSKNDVGLQS FGTEEYVKSG GLKENVPDLE VSIIEGHHFV
301: QQEEAESVNS EILSFLNKFA TEGGSA
001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
Arabidopsis Description
AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.