CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G170600.1	Wheat	cytosol	86.71	86.71
TraesCS1B01G186700.1	Wheat	cytosol	87.03	86.48
TraesCS1D01G168300.4	Wheat	peroxisome	86.71	85.62
Os10t0498200-01	Rice	cytosol, peroxisome, plastid	81.96	81.45
Os10t0498500-00	Rice	cytosol	68.99	81.04
Os10t0498300-01	Rice	cytosol, peroxisome, plastid	80.38	76.51
EES05333	Sorghum	cytosol, golgi, peroxisome	75.63	76.11
OQU91562	Sorghum	cytosol	75.63	74.45
EER94004	Sorghum	cytosol	73.73	73.97
HORVU1Hr1G044740.2	Barley	plastid	86.71	70.08
GSMUA_Achr8P14130_001	Banana	cytosol	64.87	63.47
KRH25591	Soybean	cytosol	57.91	58.28
KRH22405	Soybean	cytoskeleton, cytosol, peroxisome	57.28	58.2
VIT_12s0059g00230.t01	Wine grape	cytosol, peroxisome, vacuole	57.59	58.15
KRH55995	Soybean	nucleus	57.59	57.78
PGSC0003DMT400055784	Potato	cytosol, peroxisome, plastid	56.01	56.91
VIT_12s0059g00220.t01	Wine grape	peroxisome	56.33	56.87
VIT_12s0059g00210.t01	Wine grape	peroxisome	56.33	56.87
KRH55994	Soybean	cytosol	56.33	56.69
Solyc02g078570.2.1	Tomato	extracellular	55.06	55.24
KRH25546	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	57.91	53.98
KRH26931	Soybean	cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	47.15	53.41
KRH25547	Soybean	cytosol	24.05	50.67
KRH37569	Soybean	cytosol	26.58	46.41
KRH25548	Soybean	cytosol	25.63	46.02
KRG94755	Soybean	cytosol, peroxisome, plastid	38.92	42.27
EER90578	Sorghum	cytosol, peroxisome, plastid	20.25	37.87
OQU79732	Sorghum	cytosol	36.71	35.91
EES17493	Sorghum	cytosol	36.39	35.28
EES00506	Sorghum	cytosol	32.91	32.0
EER96138	Sorghum	cytosol, peroxisome, plastid	31.65	30.77
EES10243	Sorghum	cytosol, peroxisome, plastid	31.33	30.65
EES17023	Sorghum	extracellular, plastid, vacuole	34.49	29.14
OQU90681	Sorghum	peroxisome	32.91	25.24

Protein Annotations

EnsemblPlants:EES09308	EnsemblPlantsGene:SORBI_3005G044800	EntrezGene:8060150	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF3
PFAM:PF12697	PRINTS:PR00412	ProteinID:EES09308	ProteinID:EES09308.1	RefSeq:XP_002450320.1	SEG:seg
SUPFAM:SSF53474	unigene:Sbi.5266	UniParc:UPI0001A86917	UniProt:C5Y545	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr5:-:4222999..4225252

Molecular Weight (calculated)

35751.1 Da

IEP (calculated)

5.395

GRAVY (calculated)

-0.110

Length

316 amino acids

Sequence
(BLAST)

001: MNMEQQIKHS HLPIRGLSLH VAQAGKGELG TVVFLHGFPE IWYSWRHQML AVAAAGYRAV APDWRGYGLS DQPPEAEAAS YDDLVEDLLA ILDALSIPKA
101: FLVAKDFGAM PAYDFALRHP SRTCGVMCLG IPFLHGGSSF TSLPEGFYIL RWREPGRAEA DFGRYDVKRV VRTIYVLFSR SEIPIAKEGQ EIMDLADLST
201: PLPEWLTEDD LAVYASLYEK SGFRYPMEMP YRSLHKRMPI EDPRFQVPVF VVMGEKDYVF KFPGVESVLK DGIMEKFTPD LKITYIPEGS HFVQEQFPDK
301: VNDLLVSFLK DHPVAA

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.