Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26530 | Canola | peroxisome | 86.07 | 85.8 |
| CDY33304 | Canola | peroxisome | 86.07 | 85.8 |
| Bra038876.1-P | Field mustard | peroxisome | 85.76 | 84.71 |
| KRH69845 | Soybean | cytosol | 65.63 | 64.83 |
| KRH08141 | Soybean | cytosol | 64.4 | 63.61 |
| VIT_04s0023g02610.t01 | Wine grape | golgi, mitochondrion, peroxisome | 61.92 | 62.89 |
| Os12t0636400-01 | Rice | cytosol, peroxisome | 53.56 | 53.4 |
| TraesCS5D01G065000.1 | Wheat | cytosol | 53.56 | 53.07 |
| CDX90672 | Canola | mitochondrion | 77.4 | 52.41 |
| Zm00001d041217_P002 | Maize | extracellular | 52.32 | 52.16 |
| OQU79732 | Sorghum | cytosol | 52.01 | 52.01 |
| Zm00001d031203_P001 | Maize | cytosol | 52.94 | 51.98 |
| TraesCS6A01G029300.1 | Wheat | cytosol | 52.32 | 51.68 |
| EES17493 | Sorghum | cytosol | 51.7 | 51.23 |
| TraesCS5A01G053600.1 | Wheat | cytosol | 53.25 | 51.19 |
| Zm00001d031204_P003 | Maize | cytosol | 52.32 | 49.56 |
| HORVU6Hr1G005400.4 | Barley | cytosol, peroxisome, plastid | 52.63 | 46.83 |
| AT2G26740.1 | Thale cress | cytosol | 45.2 | 45.48 |
| AT3G05600.1 | Thale cress | cytosol | 46.44 | 45.32 |
| AT4G02340.1 | Thale cress | peroxisome | 43.96 | 43.83 |
| AT2G26750.1 | Thale cress | cytosol | 42.41 | 42.81 |
| AT4G15955.3 | Thale cress | cytosol | 39.94 | 42.43 |
| AT4G15960.1 | Thale cress | mitochondrion | 43.03 | 37.07 |
| GSMUA_Achr5P19790_001 | Banana | peroxisome | 5.26 | 34.69 |
| HORVU5Hr1G012890.5 | Barley | plastid | 34.98 | 34.56 |
| CDY28994 | Canola | mitochondrion | 76.78 | 34.4 |
| CDX90673 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:824264 | UniProt:A0A178V7A5 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 |
| ProteinID:AEE78736.1 | EMBL:AF372961 | ArrayExpress:AT3G51000 | EnsemblPlantsGene:AT3G51000 | RefSeq:AT3G51000 | TAIR:AT3G51000 |
| RefSeq:AT3G51000-TAIR-G | EnsemblPlants:AT3G51000.1 | TAIR:AT3G51000.1 | EMBL:AY074835 | Unigene:At.849 | ProteinID:CAB62622.1 |
| InterPro:Epox_hydrolase-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0016787 | InterPro:IPR029058 | RefSeq:NP_190669.1 | ProteinID:OAP01275.1 |
| PFAM:PF00561 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00412 | PANTHER:PTHR43689 | PANTHER:PTHR43689:SF5 | UniProt:Q9SD45 | SUPFAM:SSF53474 |
| UniParc:UPI00000A8B61 | : | : | : | : | : |
Description
AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
Coordinates
chr3:-:18945025..18946621
Molecular Weight (calculated)
36703.8 Da
IEP (calculated)
5.378
GRAVY (calculated)
-0.221
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.