Factsheet for Bra038876.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra034309.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51000.1	Bra034309.1-P	AT2G26740.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33304	Canola	peroxisome	98.17	99.07
AT3G51000.1	Thale cress	cytosol	84.71	85.76
Bra012875.1-P	Field mustard	cytosol	83.79	85.36
Bra036841.1-P	Field mustard	peroxisome	80.73	82.76
KRH69845	Soybean	cytosol	65.14	65.14
KRH08141	Soybean	cytosol	64.22	64.22
VIT_04s0023g02610.t01	Wine grape	golgi, mitochondrion, peroxisome	60.55	62.26
Os12t0636400-01	Rice	cytosol, peroxisome	53.52	54.01
TraesCS5D01G065000.1	Wheat	cytosol	53.52	53.68
Zm00001d041217_P002	Maize	extracellular	52.91	53.4
OQU79732	Sorghum	cytosol	52.29	52.94
TraesCS5A01G053600.1	Wheat	cytosol	53.21	51.79
TraesCS6A01G029300.1	Wheat	cytosol	51.68	51.68
Zm00001d031203_P001	Maize	cytosol	51.07	50.76
EES17493	Sorghum	cytosol	49.85	50.0
Zm00001d031204_P003	Maize	cytosol	51.99	49.85
Bra036276.1-P	Field mustard	cytosol	47.09	48.73
Bra036275.1-P	Field mustard	cytosol	45.57	47.3
Bra039422.1-P	Field mustard	cytosol	47.71	47.13
HORVU6Hr1G005400.4	Barley	cytosol, peroxisome, plastid	51.99	46.83
Bra034309.1-P	Field mustard	peroxisome	43.43	44.51
Bra012747.1-P	Field mustard	cytosol	43.12	42.73
Bra012750.1-P	Field mustard	cytosol	41.9	42.02
HORVU5Hr1G012890.5	Barley	plastid	34.56	34.56
GSMUA_Achr5P19790_001	Banana	peroxisome	4.28	28.57
Bra012876.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EnsemblPlantsGene:Bra038876	EnsemblPlants:Bra038876.1
EnsemblPlants:Bra038876.1-P	InterPro:Epox_hydrolase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	InterPro:IPR029058	UniProt:M4FCQ7	PFAM:PF00561
PRINTS:PR00412	PANTHER:PTHR43689	PANTHER:PTHR43689:SF5	SUPFAM:SSF53474	UniParc:UPI00025453CA	:

Description

AT3G51000 (E=1e-164) | epoxide hydrolase, putative

Coordinates

chrA01:+:12855732..12856954

Molecular Weight (calculated)

37023.9 Da

IEP (calculated)

5.112

GRAVY (calculated)

-0.267

Length

327 amino acids

Sequence
(BLAST)

001: MTSEVREKKI KTNGIWLNVA EKGDEGEPLV LLLHGFPETW FSWRHQIDFL SSHGYHVVAP DLRGYADSDS PPTHESYTVS HLVADVIGLL DHYGTAQAFV
101: AGHDWGAIIG WSLCLFRPDR VKGFVSLSVP YSPRDPNLKP SDLFKSFGDG LYITQFQEPG RAEAAFAKHD CLTVMKKFLL TTRSDFWVAP PNTEIIDDLE
201: VPSTLPDWIT EEEIQVYADK FQKSGFTGPL NYYRAMDLKL QELEILAPWQ GYKIVIPTKF IAGDKDIGNE GANGTIKYVK GEMFKSIVPN LEVVVIEDGH
301: HFIQQEKSER VSQEILSFFN KLRNITE

Best Arabidopsis Sequence Match ( AT3G51000.1 )
(BLAST)

001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE

Arabidopsis Description

AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.