Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50394 | Canola | peroxisome | 89.81 | 92.09 |
| CDY65636 | Canola | peroxisome | 89.81 | 92.09 |
| Bra036276.1-P | Field mustard | cytosol | 89.2 | 91.46 |
| Bra036275.1-P | Field mustard | cytosol | 85.19 | 87.62 |
| CDY65635 | Canola | cytosol | 84.88 | 87.3 |
| CDY50393 | Canola | cytosol | 64.81 | 84.34 |
| KRG96457 | Soybean | nucleus | 69.75 | 71.29 |
| VIT_07s0005g00700.t01 | Wine grape | cytosol | 64.81 | 66.25 |
| KRH68206 | Soybean | peroxisome | 58.64 | 62.91 |
| Solyc09g075300.2.1 | Tomato | cytosol | 61.42 | 62.58 |
| PGSC0003DMT400081311 | Potato | cytosol | 61.11 | 62.26 |
| AT3G05600.1 | Thale cress | cytosol | 58.02 | 56.8 |
| AT2G26740.1 | Thale cress | cytosol | 54.32 | 54.83 |
| AT4G15955.3 | Thale cress | cytosol | 50.62 | 53.95 |
| AT2G26750.1 | Thale cress | cytosol | 52.78 | 53.44 |
| Zm00001d012908_P001 | Maize | peroxisome | 16.05 | 50.98 |
| AT4G15960.1 | Thale cress | mitochondrion | 54.01 | 46.67 |
| AT3G51000.1 | Thale cress | cytosol | 43.83 | 43.96 |
| Zm00001d012907_P001 | Maize | peroxisome | 21.6 | 42.94 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:828063 | UniProt:A0A178V3C7 | ProteinID:AAC19281.1 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | ProteinID:AEE82157.1 | ArrayExpress:AT4G02340 | EnsemblPlantsGene:AT4G02340 | RefSeq:AT4G02340 | TAIR:AT4G02340 |
| RefSeq:AT4G02340-TAIR-G | EnsemblPlants:AT4G02340.1 | TAIR:AT4G02340.1 | EMBL:AY102100 | EMBL:BT000552 | ProteinID:CAB80727.1 |
| InterPro:Epox_hydrolase-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0016787 | InterPro:IPR029058 | RefSeq:NP_567228.1 | UniProt:O81299 |
| ProteinID:OAP00241.1 | PFAM:PF12697 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00111 | PRINTS:PR00412 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF13 |
| SUPFAM:SSF53474 | UniParc:UPI00000AC70B | SEG:seg | : | : | : |
Description
AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
Coordinates
chr4:+:1035596..1037615
Molecular Weight (calculated)
36658.9 Da
IEP (calculated)
6.742
GRAVY (calculated)
-0.144
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.