Factsheet for AT4G15960.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
golgi 1
endoplasmic reticulum 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09722	Canola	cytosol	76.8	87.54
Bra012747.1-P	Field mustard	cytosol	76.53	86.97
CDX90550	Canola	cytosol	76.27	86.67
CDY57860	Canola	cytosol	65.33	80.59
AT4G15955.3	Thale cress	cytosol	51.47	63.49
VIT_05s0077g02010.t01	Wine grape	cytosol	52.0	61.51
VIT_05s0077g02020.t01	Wine grape	cytosol	50.93	60.25
KRH50813	Soybean	cytosol	34.67	60.19
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	50.13	59.31
PGSC0003DMT400029422	Potato	cytosol	51.2	59.08
KRH02278	Soybean	cytosol	55.47	58.76
Solyc12g099430.1.1	Tomato	cytosol	49.87	57.89
PGSC0003DMT400011790	Potato	cytosol	49.6	57.59
PGSC0003DMT400029420	Potato	cytosol	51.2	57.48
Solyc01g066450.2.1	Tomato	cytosol	50.93	57.01
Solyc01g066460.2.1	Tomato	cytosol, peroxisome	29.6	56.92
Solyc01g066470.2.1	Tomato	cytosol, peroxisome	29.07	55.9
PGSC0003DMT400060250	Potato	cytosol	47.2	55.14
Solyc05g054350.2.1	Tomato	plastid	46.93	54.83
PGSC0003DMT400060254	Potato	extracellular	46.4	54.21
AT2G26750.1	Thale cress	cytosol	46.13	54.06
AT4G02340.1	Thale cress	peroxisome	46.67	54.01
Solyc05g054320.2.1	Tomato	cytosol	46.13	53.89
AT2G26740.1	Thale cress	cytosol	46.13	53.89
AT3G05600.1	Thale cress	cytosol	46.93	53.17
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	25.6	50.26
AT3G51000.1	Thale cress	cytosol	37.07	43.03
VIT_05s0077g02030.t01	Wine grape	mitochondrion	9.6	38.3

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	EntrezGene:827279	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	ProteinID:AEE83674.1
ArrayExpress:AT4G15960	EnsemblPlantsGene:AT4G15960	RefSeq:AT4G15960	TAIR:AT4G15960	RefSeq:AT4G15960-TAIR-G	EnsemblPlants:AT4G15960.1
TAIR:AT4G15960.1	Unigene:At.47259	InterPro:Epox_hydrolase-like	UniProt:F4JKY6	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:IPR029058	RefSeq:NP_193331.6	PFAM:PF00561	PO:PO:0000293	PRINTS:PR00111
PRINTS:PR00412	PANTHER:PTHR43329	PANTHER:PTHR43329:SF13	SUPFAM:SSF53474	UniParc:UPI0001A7B0D5	SEG:seg

Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JKY6]

Coordinates

chr4:-:9045610..9047449

Molecular Weight (calculated)

43062.5 Da

IEP (calculated)

8.406

GRAVY (calculated)

-0.435

Length

375 amino acids

Sequence
(BLAST)

001: MFFLCRKLSL SRFRHHFPLR LRRFLGENPN PTTHFSTLPD NQTKRPEKSR LDGVEHKTLK VNGINMHVAE KPGSGSGEDP IILFLHGFPE LWYTWRHQMV
101: ALSSLGYRTI APDLRGYGDT EAPEKVEDYT YLNVDGDVVA LIDAVTGGDK AVSVVGHDWG AMIAWQLCQY RPEKVKALVN MSVLFSPRNP VRVPVPTLRH
201: VFGDDYYVCR FQKAGEIETE FKKLGTENVL KEFLTYKTPG PLNLPKDKYF KRSENAASAL PLWLTQEDLD YYVTKYENKG FTGPINYYRN IDRNWELTAP
301: WTGAKIRVPV KFIIGDQDLT YNFPGAKEYI NGGGFKRDVP LLDETVVLKG LGHFLHEENP DVINQHIHNF FHKFL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.