Factsheet for PGSC0003DMT400029422

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g066460.2.1	Tomato	cytosol, peroxisome	55.38	92.31
Solyc01g066470.2.1	Tomato	cytosol, peroxisome	55.08	91.79
PGSC0003DMT400011790	Potato	cytosol	72.62	73.06
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	62.77	64.35
PGSC0003DMT400029420	Potato	cytosol	65.54	63.77
PGSC0003DMT400060254	Potato	extracellular	62.46	63.24
VIT_05s0077g02020.t01	Wine grape	cytosol	61.23	62.78
VIT_05s0077g02010.t01	Wine grape	cytosol	60.92	62.46
PGSC0003DMT400060250	Potato	cytosol	61.54	62.31
KRH50813	Soybean	cytosol	41.23	62.04
PGSC0003DMT400046206	Potato	peroxisome	60.0	61.32
CDY09722	Canola	cytosol	61.54	60.79
Bra012747.1-P	Field mustard	cytosol	61.54	60.61
GSMUA_Achr8P10290_001	Banana	cytosol	59.38	60.5
CDX90550	Canola	cytosol	61.23	60.3
GSMUA_Achr3P08130_001	Banana	cytosol	58.15	59.62
KRH02278	Soybean	cytosol	64.92	59.6
PGSC0003DMT400081311	Potato	cytosol	57.85	59.12
PGSC0003DMT400063718	Potato	cytosol	56.92	58.92
GSMUA_AchrUn_...	Banana	peroxisome	56.0	57.41
TraesCS7D01G224000.1	Wheat	unclear	56.31	56.83
TraesCS7A01G225600.1	Wheat	cytosol	56.31	56.83
GSMUA_Achr8P22510_001	Banana	peroxisome	47.69	56.78
TraesCS7D01G228900.1	Wheat	cytosol	53.54	56.49
Os01t0255000-01	Rice	cytosol	55.69	56.21
TraesCS7B01G194000.1	Wheat	cytosol	55.69	56.04
CDY57860	Canola	cytosol	52.31	55.92
TraesCS7B01G128800.1	Wheat	cytosol	55.38	55.9
CDY09727	Canola	cytosol	56.0	55.66
TraesCS7B01G129100.1	Wheat	cytosol	55.08	55.59
CDX90553	Canola	cytosol	55.69	55.52
EES00506	Sorghum	cytosol	55.38	55.38
Os05t0273800-01	Rice	cytosol, peroxisome, plastid	56.31	55.29
Bra012750.1-P	Field mustard	cytosol	55.38	55.21
HORVU7Hr1G045620.2	Barley	cytosol, mitochondrion, peroxisome	26.15	55.19
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	32.31	54.97
TraesCS7B01G128900.1	Wheat	unclear	54.46	54.97
TraesCS7A01G222400.1	Wheat	cytosol	51.08	54.79
TraesCS3D01G180600.1	Wheat	peroxisome	53.54	54.04
TraesCS3B01G204900.1	Wheat	peroxisome	53.23	53.73
Os01t0255100-01	Rice	cytosol	53.23	53.4
AT4G15955.3	Thale cress	cytosol	49.85	53.29
TraesCS3A01G175200.2	Wheat	peroxisome	52.62	53.11
HORVU3Hr1G070830.1	Barley	cytosol, peroxisome	28.0	52.3
HORVU7Hr1G045640.2	Barley	plastid	56.31	51.99
TraesCS7D01G224200.1	Wheat	golgi, unclear	55.38	51.28
AT4G15960.1	Thale cress	mitochondrion	59.08	51.2
TraesCS7A01G222600.1	Wheat	golgi, unclear	54.77	50.57
HORVU3Hr1G070810.3	Barley	cytosol, peroxisome	16.0	50.49
EES17023	Sorghum	extracellular, plastid, vacuole	54.15	47.06
VIT_05s0077g02030.t01	Wine grape	mitochondrion	13.23	45.74
HORVU3Hr1G035400.1	Barley	plastid	54.77	43.95
PGSC0003DMT400057633	Potato	peroxisome	35.69	36.83
PGSC0003DMT400057630	Potato	peroxisome, plasma membrane, plastid	36.92	36.59
PGSC0003DMT400055784	Potato	cytosol, peroxisome, plastid	34.46	36.01
GSMUA_Achr3P24120_001	Banana	cytosol	53.85	27.6

Protein Annotations

EntrezGene:102590378	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like
GO:GO:0003674	GO:GO:0003824	InterPro:IPR029058	UniProt:M1ASS7	PFAM:PF00561	EnsemblPlantsGene:PGSC0003DMG400011311
PGSC:PGSC0003DMG400011311	EnsemblPlants:PGSC0003DMT400029422	PRINTS:PR00111	PRINTS:PR00412	PANTHER:PTHR43329	PANTHER:PTHR43329:SF13
SUPFAM:SSF53474	UniParc:UPI000296E947	RefSeq:XP_006342824.1	SEG:seg	:	:

Description

Epoxide hydrolase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400011311]

Coordinates

chr1:+:57365380..57366893

Molecular Weight (calculated)

36957.8 Da

IEP (calculated)

5.960

GRAVY (calculated)

-0.109

Length

325 amino acids

Sequence
(BLAST)

001: MEKVEHKTMR VNGINMHIAE MGQGPIVLFL HGFPELWYSW RHQMPFMAAH GYRVVAPDLR GFGDTTGAPK GDFTKFTTLH VVGDLVELLN IIAPDQKVFL
101: VGHDWGAMIA WDMCLYRPDK IKALVNMSVP FFPRNPIIRP IVALRAIYGD EYYIIRFQEP GEIEEEFAQI GTKTVLEKML TIRDPEPLKL PKGKPFDDSP
201: VILPPWLTET DVDYYATKYE HTGFTGGLNY YRALDLNWEL TAPWTGAKIE VPVKFIVGDL DLTYNSAGVK FYINKGGLKK NVPLLEDVVI LKGVAHFLQQ
301: EKPDEVNEHI HVFFQSFSSS ETSAL

Best Arabidopsis Sequence Match ( AT4G02340.1 )
(BLAST)

001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL

Arabidopsis Description

AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.