Factsheet for PGSC0003DMT400057633

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g078570.2.1	Tomato	extracellular	94.6	94.6
PGSC0003DMT400057630	Potato	peroxisome, plasma membrane, plastid	84.13	80.79
PGSC0003DMT400055784	Potato	cytosol, peroxisome, plastid	63.49	64.31
PGSC0003DMT400060250	Potato	cytosol	38.1	37.38
PGSC0003DMT400060254	Potato	extracellular	37.46	36.76
PGSC0003DMT400046206	Potato	peroxisome	36.83	36.48
PGSC0003DMT400081311	Potato	cytosol	36.83	36.48
PGSC0003DMT400029422	Potato	cytosol	36.83	35.69
PGSC0003DMT400029420	Potato	cytosol	37.46	35.33
PGSC0003DMT400011790	Potato	cytosol	36.19	35.29
PGSC0003DMT400063718	Potato	cytosol	34.29	34.39

Protein Annotations

EnsemblPlants:PGSC0003DMT400057633	EnsemblPlantsGene:PGSC0003DMG400022379	EntrezGene:102602039	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF19
PFAM:PF00561	PGSC:PGSC0003DMG400022379	PRINTS:PR00111	PRINTS:PR00412	RefSeq:XP_006347071.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0002951ECC	UniProt:M1C1E7	MapMan:35.2	:	:

Description

Epoxide hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG400022379]

Coordinates

chr2:-:34247017..34250115

Molecular Weight (calculated)

35513.6 Da

IEP (calculated)

4.952

GRAVY (calculated)

-0.043

Length

315 amino acids

Sequence
(BLAST)

001: MEEIEHKYIE VNGLKLHIAE IGSGSSPVVV FLHGFPEIWY SWRYQMLAVA KAGYRAIAPD FRGYGLSDQP TQPEKTTFLD LNNDLLALLD ALNISKVFLV
101: GKDFGSFVVS YFSILHKERV SGFIVMGVPF LPPKPLEFKQ GLPEGFYVSR FGVPGRAEAD FGRLDAKTVV RNVYILFSRS EIPIANEDQE IMDIVQPSTP
201: LPPWFSEEDL TAYGALYENS GFRTALQVPY RSLHEQVNIT DPTVHVPALF IKGEKDYFLK FPGIEDYISS GVLKSLVPNL QIVNLPEGTH FVQEQLPDEV
301: NHLVLEFLTK NSKLQ

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.