Factsheet for PGSC0003DMT400060250

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g054350.2.1	Tomato	plastid	93.46	93.46
PGSC0003DMT400060254	Potato	extracellular	89.1	89.1
PGSC0003DMT400011790	Potato	cytosol	65.11	64.71
KRH50813	Soybean	cytosol	41.43	61.57
PGSC0003DMT400029422	Potato	cytosol	62.31	61.54
GSMUA_Achr3P08130_001	Banana	cytosol	60.44	61.2
PGSC0003DMT400046206	Potato	peroxisome	60.44	61.01
GSMUA_Achr8P10290_001	Banana	cytosol	60.44	60.81
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	59.81	60.57
KRH02278	Soybean	cytosol	66.67	60.45
PGSC0003DMT400063718	Potato	cytosol	58.88	60.19
PGSC0003DMT400081311	Potato	cytosol	58.88	59.43
VIT_05s0077g02010.t01	Wine grape	cytosol	58.57	59.31
PGSC0003DMT400029420	Potato	cytosol	61.68	59.28
VIT_05s0077g02020.t01	Wine grape	cytosol	57.63	58.36
GSMUA_AchrUn_...	Banana	peroxisome	57.63	58.36
GSMUA_Achr8P22510_001	Banana	peroxisome	48.6	57.14
TraesCS7B01G129100.1	Wheat	cytosol	56.39	56.21
TraesCS7D01G228900.1	Wheat	cytosol	53.58	55.84
Os01t0255000-01	Rice	cytosol	55.76	55.59
CDY09722	Canola	cytosol	56.7	55.32
Os05t0273800-01	Rice	cytosol, peroxisome, plastid	57.01	55.29
Bra012750.1-P	Field mustard	cytosol	56.07	55.21
CDY09727	Canola	cytosol	56.07	55.05
CDX90553	Canola	cytosol	55.76	54.91
CDX90550	Canola	cytosol	56.39	54.85
Bra012747.1-P	Field mustard	cytosol	56.39	54.85
AT4G15955.3	Thale cress	cytosol	51.71	54.61
TraesCS7A01G225600.1	Wheat	cytosol	54.52	54.35
TraesCS3D01G180600.1	Wheat	peroxisome	54.21	54.04
TraesCS7B01G128800.1	Wheat	cytosol	53.89	53.73
TraesCS3A01G175200.2	Wheat	peroxisome	53.89	53.73
TraesCS3B01G204900.1	Wheat	peroxisome	53.89	53.73
TraesCS7A01G222400.1	Wheat	cytosol	50.47	53.47
TraesCS7D01G224000.1	Wheat	unclear	53.58	53.42
TraesCS7B01G194000.1	Wheat	cytosol	53.58	53.25
TraesCS7B01G128900.1	Wheat	unclear	52.96	52.8
EES00506	Sorghum	cytosol	53.27	52.62
HORVU7Hr1G045640.2	Barley	plastid	57.32	52.27
CDY57860	Canola	cytosol	49.22	51.97
TraesCS7D01G224200.1	Wheat	golgi, unclear	56.7	51.85
Os01t0255100-01	Rice	cytosol	52.02	51.54
TraesCS7A01G222600.1	Wheat	golgi, unclear	56.39	51.42
HORVU3Hr1G070810.3	Barley	cytosol, peroxisome	16.2	50.49
HORVU7Hr1G045620.2	Barley	cytosol, mitochondrion, peroxisome	23.68	49.35
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	29.28	49.21
HORVU3Hr1G070830.1	Barley	cytosol, peroxisome	26.17	48.28
EES17023	Sorghum	extracellular, plastid, vacuole	55.45	47.59
AT4G15960.1	Thale cress	mitochondrion	55.14	47.2
VIT_05s0077g02030.t01	Wine grape	mitochondrion	13.4	45.74
HORVU3Hr1G035400.1	Barley	plastid	54.83	43.46
PGSC0003DMT400057633	Potato	peroxisome	37.38	38.1
PGSC0003DMT400057630	Potato	peroxisome, plasma membrane, plastid	38.01	37.2
PGSC0003DMT400055784	Potato	cytosol, peroxisome, plastid	35.51	36.66
GSMUA_Achr3P24120_001	Banana	cytosol	56.39	28.55

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	ProteinID:AAA81889	ProteinID:AAA81889.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:Epox_hydrolase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	InterPro:IPR029058	UniProt:M1C5H2
PFAM:PF00561	EnsemblPlantsGene:PGSC0003DMG401023438	PGSC:PGSC0003DMG401023438	EnsemblPlants:PGSC0003DMT400060250	PRINTS:PR00412	PANTHER:PTHR43329
PANTHER:PTHR43329:SF13	MEROPS:S33.971	SUPFAM:SSF53474	EMBL:U02494	UniParc:UPI0002964A89	SEG:seg

Description

Epoxide hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG401023438]

Coordinates

chr5:-:50066047..50069936

Molecular Weight (calculated)

36154.5 Da

IEP (calculated)

6.188

GRAVY (calculated)

-0.039

Length

321 amino acids

Sequence
(BLAST)

001: MEKIEHKMVA VNGLNMHIAE LGQGPTILFL HGFPELWYSW RHQMVYLAEC GYRAVAPDLR GYGDTTGASL NDPSKFSILQ LVGDVVALLE AIALNEEKVF
101: VVAHDWGALI AWHLCLFRPD KVNALVNLSV HFLPRNPKMN TVEGLKAVYG EHHYISRFQV PGEIEAEFAP IGAKSVLKKI LTFRDPAPFY FPKGKGLEAL
201: PDAPVALSSW LSEEELDYYA NKFEQTGFTG AVNYYRALPI NWELTAPWTG AQVKVPTKFI VGEFDLVYHI PGAKEYIHNG GFKKDVPLLE EVVVLEGAAH
301: FVNQERPNEI SKHIYDFIQK F

Best Arabidopsis Sequence Match ( AT3G05600.1 )
(BLAST)

001: MEGIDHRMVS VNGITMHIAE KGPKEGPVVL LLHGFPDLWY TWRHQISGLS SLGYRAVAPD LRGYGDSDSP ESFSEYTCLN VVGDLVALLD SVAGNQEKVF
101: LVGHDWGAII GWFLCLFRPE KINGFVCLSV PYRSRNPKVK PVQGFKAVFG DDYYICRFQE PGKIEGEIAS ADPRIFLRNL FTGRTLGPPI LPKDNPFGEK
201: PNPNSENIEL PEWFSKKDLD FYVSKFEKAG FTGGLNYYRA MDLNWELTAP WTGAKIQVPV KFMTGDFDMV YTTPGMKEYI HGGGFAADVP TLQEIVVIED
301: AGHFVNQEKP QEVTAHINDF FTKLRDNNKS F

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.