Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09722 | Canola | cytosol | 83.22 | 76.9 |
| CDX90550 | Canola | cytosol | 81.91 | 75.45 |
| AT4G15960.1 | Thale cress | mitochondrion | 80.59 | 65.33 |
| CDY09727 | Canola | cytosol | 61.18 | 56.88 |
| VIT_05s0077g02010.t01 | Wine grape | cytosol | 59.21 | 56.78 |
| CDX90553 | Canola | cytosol | 60.2 | 56.13 |
| VIT_05s0077g02020.t01 | Wine grape | cytosol | 56.58 | 54.26 |
| VIT_05s0077g01990.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 55.26 | 53.0 |
| CDY65636 | Canola | peroxisome | 54.61 | 52.53 |
| PGSC0003DMT400029422 | Potato | cytosol | 55.92 | 52.31 |
| CDY50394 | Canola | peroxisome | 53.95 | 51.9 |
| KRH02278 | Soybean | cytosol | 60.2 | 51.69 |
| PGSC0003DMT400011790 | Potato | cytosol | 53.95 | 50.77 |
| CDX77051 | Canola | cytosol | 27.3 | 50.61 |
| CDY65635 | Canola | cytosol | 52.3 | 50.48 |
| Solyc05g054350.2.1 | Tomato | plastid | 52.96 | 50.16 |
| Solyc12g099430.1.1 | Tomato | cytosol | 53.29 | 50.15 |
| PGSC0003DMT400029420 | Potato | cytosol | 54.28 | 49.4 |
| Solyc05g054320.2.1 | Tomato | cytosol | 51.97 | 49.22 |
| PGSC0003DMT400060254 | Potato | extracellular | 51.97 | 49.22 |
| PGSC0003DMT400060250 | Potato | cytosol | 51.97 | 49.22 |
| CDY05187 | Canola | cytosol | 54.93 | 49.12 |
| Solyc01g066450.2.1 | Tomato | cytosol | 53.95 | 48.96 |
| CDY27752 | Canola | cytosol | 54.28 | 48.53 |
| Solyc01g066470.2.1 | Tomato | cytosol, peroxisome | 30.92 | 48.21 |
| Solyc01g066460.2.1 | Tomato | cytosol, peroxisome | 30.92 | 48.21 |
| KRH50813 | Soybean | cytosol | 34.21 | 48.15 |
| CDY48181 | Canola | peroxisome | 49.67 | 47.34 |
| VIT_05s0077g02000.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 29.28 | 46.6 |
| CDY50393 | Canola | cytosol | 38.16 | 46.59 |
| CDX77049 | Canola | peroxisome | 22.37 | 41.46 |
| CDX77050 | Canola | peroxisome | 22.37 | 41.46 |
| CDX73754 | Canola | cytosol, peroxisome, plastid | 22.7 | 40.35 |
| CDY26530 | Canola | peroxisome | 41.45 | 38.89 |
| CDY33304 | Canola | peroxisome | 41.12 | 38.58 |
| CDX77971 | Canola | cytosol, peroxisome, plastid | 39.14 | 36.73 |
| VIT_05s0077g02030.t01 | Wine grape | mitochondrion | 11.18 | 36.17 |
| CDX90672 | Canola | mitochondrion | 36.51 | 23.27 |
| CDY28994 | Canola | mitochondrion | 36.84 | 15.53 |
| CDX90673 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY57860 | EnsemblPlantsGene:GSBRNA2T00022766001 | Gene3D:3.40.50.1820 | GO:A0A078J583 | GO:GO:0003674 | GO:GO:0003824 |
| InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF13 |
| PFAM:PF12697 | PRINTS:PR00111 | PRINTS:PR00412 | ProteinID:CDY57860 | ProteinID:CDY57860.1 | SUPFAM:SSF53474 |
| UniParc:UPI0004EE0389 | UniProt:A0A078J583 | MapMan:35.2 | : | : | : |
Description
BnaC08g47760DBnaC08g47760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J583]
Coordinates
chrLK033611:+:35250..36977
Molecular Weight (calculated)
34466.0 Da
IEP (calculated)
5.993
GRAVY (calculated)
-0.253
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGLDGVEHK TLKVNGINMH VAEIPASGSG RDQIILFIHG FPELWYTWRH QMTALSSLGY RTIAPDLRGY GDTDAPEKVE EYTYLNVVGD LVALIDAVAG
101: GDEAVFLVGH DWGALIAWQL CMYRPEKVKA LVNMSVALSP RNQDRVPMPT FRRLFGDDYY ICRFQSSQIL FFLSTEQTFK RPENAASATK QWLTQEDLEY
201: YVSKYEKKGF TGAINYYRNI DRNWELTAPS TGAKIGVPVK FIVGDQDLTY NSPGIKEYIH GGGFKRDVQL LDETVVLNGV GHFLHEENPD VINQHIHSFF
301: QKFI
101: GDEAVFLVGH DWGALIAWQL CMYRPEKVKA LVNMSVALSP RNQDRVPMPT FRRLFGDDYY ICRFQSSQIL FFLSTEQTFK RPENAASATK QWLTQEDLEY
201: YVSKYEKKGF TGAINYYRNI DRNWELTAPS TGAKIGVPVK FIVGDQDLTY NSPGIKEYIH GGGFKRDVQL LDETVVLNGV GHFLHEENPD VINQHIHSFF
301: QKFI
001: MFFLCRKLSL SRFRHHFPLR LRRFLGENPN PTTHFSTLPD NQTKRPEKSR LDGVEHKTLK VNGINMHVAE KPGSGSGEDP IILFLHGFPE LWYTWRHQMV
101: ALSSLGYRTI APDLRGYGDT EAPEKVEDYT YLNVDGDVVA LIDAVTGGDK AVSVVGHDWG AMIAWQLCQY RPEKVKALVN MSVLFSPRNP VRVPVPTLRH
201: VFGDDYYVCR FQKAGEIETE FKKLGTENVL KEFLTYKTPG PLNLPKDKYF KRSENAASAL PLWLTQEDLD YYVTKYENKG FTGPINYYRN IDRNWELTAP
301: WTGAKIRVPV KFIIGDQDLT YNFPGAKEYI NGGGFKRDVP LLDETVVLKG LGHFLHEENP DVINQHIHNF FHKFL
101: ALSSLGYRTI APDLRGYGDT EAPEKVEDYT YLNVDGDVVA LIDAVTGGDK AVSVVGHDWG AMIAWQLCQY RPEKVKALVN MSVLFSPRNP VRVPVPTLRH
201: VFGDDYYVCR FQKAGEIETE FKKLGTENVL KEFLTYKTPG PLNLPKDKYF KRSENAASAL PLWLTQEDLD YYVTKYENKG FTGPINYYRN IDRNWELTAP
301: WTGAKIRVPV KFIIGDQDLT YNFPGAKEYI NGGGFKRDVP LLDETVVLKG LGHFLHEENP DVINQHIHNF FHKFL
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JKY6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.