CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034309.1-P	Field mustard	peroxisome	99.69	99.69
CDX77049	Canola	peroxisome	50.47	98.17
CDX77050	Canola	peroxisome	50.47	98.17
CDX77051	Canola	cytosol	48.28	93.9
AT2G26740.1	Thale cress	cytosol	82.13	81.62
AT2G26750.1	Thale cress	cytosol	79.62	79.38
HORVU3Hr1G070810.3	Barley	cytosol, peroxisome	18.81	58.25
TraesCS7D01G228900.1	Wheat	cytosol	54.55	56.49
TraesCS7D01G224000.1	Wheat	unclear	55.49	54.97
TraesCS7B01G128800.1	Wheat	cytosol	55.17	54.66
TraesCS7A01G225600.1	Wheat	cytosol	55.17	54.66
TraesCS3D01G180600.1	Wheat	peroxisome	54.86	54.35
EES00506	Sorghum	cytosol	55.17	54.15
CDY09722	Canola	cytosol	55.8	54.1
TraesCS3B01G204900.1	Wheat	peroxisome	54.55	54.04
TraesCS7B01G129100.1	Wheat	cytosol	54.55	54.04
TraesCS7A01G222400.1	Wheat	cytosol	51.1	53.8
TraesCS3A01G175200.2	Wheat	peroxisome	54.23	53.73
TraesCS7B01G194000.1	Wheat	cytosol	54.23	53.56
TraesCS7B01G128900.1	Wheat	unclear	53.92	53.42
CDX90550	Canola	cytosol	55.17	53.33
CDY65636	Canola	peroxisome	52.66	53.16
CDY09727	Canola	cytosol	54.23	52.91
CDY50394	Canola	peroxisome	52.35	52.85
CDX90553	Canola	cytosol	53.92	52.76
CDY65635	Canola	cytosol	51.72	52.38
CDY05187	Canola	cytosol	55.8	52.35
Os05t0273800-01	Rice	cytosol, peroxisome, plastid	53.92	51.96
Os01t0255000-01	Rice	cytosol	52.35	51.86
CDY27752	Canola	cytosol	55.17	51.76
Os01t0255100-01	Rice	cytosol	52.04	51.23
HORVU7Hr1G045640.2	Barley	plastid	55.8	50.57
Zm00001d040290_P001	Maize	peroxisome	56.11	50.28
TraesCS7D01G224200.1	Wheat	golgi, unclear	54.86	49.86
TraesCS7A01G222600.1	Wheat	golgi, unclear	54.86	49.72
CDY57860	Canola	cytosol	47.34	49.67
CDY50393	Canola	cytosol	37.62	48.19
EES17023	Sorghum	extracellular, plastid, vacuole	53.6	45.72
CDX73754	Canola	cytosol, peroxisome, plastid	24.14	45.03
CDY33304	Canola	peroxisome	45.14	44.44
HORVU3Hr1G070830.1	Barley	cytosol, peroxisome	24.14	44.25
HORVU7Hr1G045620.2	Barley	cytosol, mitochondrion, peroxisome	21.32	44.16
CDY26530	Canola	peroxisome	44.83	44.14
Zm00001d023651_P001	Maize	extracellular	53.29	42.82
HORVU3Hr1G035400.1	Barley	plastid	54.23	42.72
CDX77971	Canola	cytosol, peroxisome, plastid	41.38	40.74
GSMUA_Achr3P24120_001	Banana	cytosol	59.87	30.13
CDX90672	Canola	mitochondrion	40.13	26.83
CDY28994	Canola	mitochondrion	40.13	17.75
CDX90673	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY48181	EnsemblPlantsGene:GSBRNA2T00088996001	Gene3D:3.40.50.1820	GO:A0A078IDW8	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329
PANTHER:PTHR43329:SF13	PFAM:PF00561	PRINTS:PR00111	PRINTS:PR00412	ProteinID:CDY48181	ProteinID:CDY48181.1
SUPFAM:SSF53474	UniParc:UPI0004EE56BF	UniProt:A0A078IDW8	MapMan:35.2	:	:

Description

BnaA04g15450DBnaA04g15450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDW8]

Coordinates

chrLK032758:-:49810..52178

Molecular Weight (calculated)

36168.5 Da

IEP (calculated)

5.614

GRAVY (calculated)

-0.110

Length

319 amino acids

Sequence
(BLAST)

001: MEHRKLRGNG VDIHVAIQGP SDGPVVLLIH GFPTLWYSWR HQIPGLAALG YRAVAPDLRG YGDSDAPPEI SSYTCFHMVG DMIAVISALT EDKVFVVGHD
101: WGALIAWYLC LFRPDKVKAL VNLSVPFSLG GPIDPTVKPL DVLRKFYGDD FYMCRFQEVG EIEAEISEVG VERVVRRILT YRTPRPLILP KDKSFWGPKD
201: ETIPLPSWLT EEDVAYYVSK FQEKGYTGGV NYYRNFDRNN ELLAPWVGCK IQVPTKFAIG EQDLVYHFPG AREYIHGPKF KEDVPLLEEP VVIEGAAHFV
301: NQEKPQEILQ LIVDFISKF

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.