CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27752	Canola	cytosol	96.47	96.47
AT3G05600.1	Thale cress	cytosol	87.06	89.43
VIT_14s0060g01940.t01	Wine grape	cytosol	61.18	65.62
Solyc01g099910.2.1	Tomato	cytosol	60.29	65.29
KRH68486	Soybean	cytosol	60.59	65.19
PGSC0003DMT400063718	Potato	cytosol	60.0	64.97
KRG92916	Soybean	nucleus	61.47	64.91
KRG96773	Soybean	nucleus	58.53	62.97
KRH68487	Soybean	cytosol	58.82	62.89
KRG96774	Soybean	nucleus	58.82	62.89
KRG96771	Soybean	nucleus	62.94	62.76
KRG96772	Soybean	nucleus	59.41	59.94
CDY65635	Canola	cytosol	55.0	59.37
CDY50394	Canola	peroxisome	55.0	59.18
CDY65636	Canola	peroxisome	54.71	58.86
CDX77051	Canola	cytosol	27.65	57.32
CDY50393	Canola	cytosol	40.88	55.82
CDY48181	Canola	peroxisome	52.35	55.8
CDY57860	Canola	cytosol	49.12	54.93
CDX90553	Canola	cytosol	51.76	53.99
CDY09722	Canola	cytosol	52.06	53.8
CDY09727	Canola	cytosol	51.47	53.52
CDX90550	Canola	cytosol	51.47	53.03
CDX77050	Canola	peroxisome	25.29	52.44
CDX77049	Canola	peroxisome	25.29	52.44
CDX73754	Canola	cytosol, peroxisome, plastid	25.59	50.88
CDY26530	Canola	peroxisome	46.47	48.77
CDY33304	Canola	peroxisome	46.18	48.46
CDX77971	Canola	cytosol, peroxisome, plastid	45.0	47.22
CDX90672	Canola	mitochondrion	42.35	30.19
CDY28994	Canola	mitochondrion	42.94	20.25
CDX90673	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY05187	EnsemblPlantsGene:GSBRNA2T00119993001	Gene3D:3.40.50.1820	GO:A0A078EW50	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	ncoils:Coil	PANTHER:PTHR43329
PANTHER:PTHR43329:SF20	PFAM:PF12697	PRINTS:PR00412	ProteinID:CDY05187	ProteinID:CDY05187.1	SUPFAM:SSF53474
UniParc:UPI0004EE7EB9	MapMan:35.2	:	:	:	:

Description

BnaC05g46160D

Coordinates

chrLK031960:-:244494..245818

Molecular Weight (calculated)

38256.5 Da

IEP (calculated)

5.014

GRAVY (calculated)

-0.305

Length

340 amino acids

Sequence
(BLAST)

001: MDPTKNKGEM EGIDHRMVSV NGITMHIAEK GPKEGTVVLL LHGFPDLWYT WRHQITALSS LGYRAVAPDL RGYGDSDSPE SFSEYTCLHL VGDLVALLDS
101: VVGDQEKVFL VGHDWGAIVG WYLCLFRPEK IKGFVCLSVP YRPRNPKVKP VEGFKAVFGD DYYICRFQEP GKAEGEIACA DPRRVLKNIF TGRELGPPIL
201: PKDNPFGANP NPNCEQVELP EWFSKEDLDY YVSKFEKTGF TGGLNYYRAM DLTWELTAPW TGAKIQVPVK FMTGDLDMVY TTPGVKEYIH GGGFAADVPN
301: LQEVVVIEDA GHFVNQEKPQ EVTAHINDFF TKLQDNYRSF

Best Arabidopsis Sequence Match ( AT3G05600.1 )
(BLAST)

001: MEGIDHRMVS VNGITMHIAE KGPKEGPVVL LLHGFPDLWY TWRHQISGLS SLGYRAVAPD LRGYGDSDSP ESFSEYTCLN VVGDLVALLD SVAGNQEKVF
101: LVGHDWGAII GWFLCLFRPE KINGFVCLSV PYRSRNPKVK PVQGFKAVFG DDYYICRFQE PGKIEGEIAS ADPRIFLRNL FTGRTLGPPI LPKDNPFGEK
201: PNPNSENIEL PEWFSKKDLD FYVSKFEKAG FTGGLNYYRA MDLNWELTAP WTGAKIQVPV KFMTGDFDMV YTTPGMKEYI HGGGFAADVP TLQEIVVIED
301: AGHFVNQEKP QEVTAHINDF FTKLRDNNKS F

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M9W5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.