CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
plastid 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036276.1-P	Field mustard	cytosol	99.05	99.05
CDY65636	Canola	peroxisome	99.05	99.05
AT4G02340.1	Thale cress	peroxisome	92.09	89.81
CDY65635	Canola	cytosol	88.61	88.89
CDY50393	Canola	cytosol	67.41	85.54
KRG96457	Soybean	nucleus	70.25	70.03
VIT_07s0005g00700.t01	Wine grape	cytosol	65.82	65.62
Solyc09g075300.2.1	Tomato	cytosol	64.24	63.84
PGSC0003DMT400081311	Potato	cytosol	63.29	62.89
KRH68206	Soybean	peroxisome	58.23	60.93
CDX77051	Canola	cytosol	28.8	55.49
CDY05187	Canola	cytosol	59.18	55.0
CDX90553	Canola	cytosol	56.01	54.29
CDY09727	Canola	cytosol	56.01	54.13
CDY57860	Canola	cytosol	51.9	53.95
CDY09722	Canola	cytosol	56.01	53.8
CDY27752	Canola	cytosol	57.59	53.53
CDX90550	Canola	cytosol	55.38	53.03
CDY48181	Canola	peroxisome	52.85	52.35
Zm00001d012908_P001	Maize	peroxisome	16.14	50.0
CDX77050	Canola	peroxisome	25.0	48.17
CDX77049	Canola	peroxisome	25.0	48.17
Zm00001d012907_P001	Maize	peroxisome	24.37	47.24
CDY33304	Canola	peroxisome	48.42	47.22
CDY26530	Canola	peroxisome	47.78	46.6
CDX73754	Canola	cytosol, peroxisome, plastid	25.0	46.2
CDX77971	Canola	cytosol, peroxisome, plastid	44.62	43.52
CDX90672	Canola	mitochondrion	42.72	28.3
CDY28994	Canola	mitochondrion	43.04	18.86
CDX90673	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY50394	EnsemblPlantsGene:GSBRNA2T00096616001	Gene3D:3.40.50.1820	GO:A0A078ILX5	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF13
PFAM:PF12697	PRINTS:PR00111	PRINTS:PR00412	ProteinID:CDY50394	ProteinID:CDY50394.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EE51EE	UniProt:A0A078ILX5	MapMan:35.2	:	:

Description

BnaCnng19260DBnaCnng19260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILX5]

Coordinates

chrLK032905:-:97452..99762

Molecular Weight (calculated)

35626.7 Da

IEP (calculated)

6.179

GRAVY (calculated)

-0.118

Length

316 amino acids

Sequence
(BLAST)

001: MEKIEHTTIS TNGINLHVAS IGSGPAILFL HGFPDLWYSW RRQLLSFAGL GYRAIAPDLR GYGDSDSPPS HESYTVLHVV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWM CMIRPDRVKA LVNTSVVFNP RNPSVKPVDA FKALFGEDYY ICRFQEPGEI EEDFAQVDTK KLINRFFTSR NPRPPCIPKS LGFRGLPDPP
201: ALPAWLTEED VSFYAEKFSQ KGFTGGLNYY RAMNLSWELT APWAGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLQQE
301: KPDEVTDHIY GFFSKF

Best Arabidopsis Sequence Match ( AT4G02340.1 )
(BLAST)

001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL

Arabidopsis Description

AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.