CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65635	Canola	cytosol	94.78	74.92
CDY50394	Canola	peroxisome	85.54	67.41
CDY65636	Canola	peroxisome	85.14	67.09
AT4G02340.1	Thale cress	peroxisome	84.34	64.81
KRG96457	Soybean	nucleus	65.86	51.73
Solyc09g075300.2.1	Tomato	cytosol	60.24	47.17
PGSC0003DMT400081311	Potato	cytosol	59.84	46.86
KRH68206	Soybean	peroxisome	56.63	46.69
VIT_07s0005g00700.t01	Wine grape	cytosol	59.04	46.37
CDX77049	Canola	peroxisome	29.72	45.12
CDX77050	Canola	peroxisome	29.72	45.12
Zm00001d012907_P001	Maize	peroxisome	27.31	41.72
CDY05187	Canola	cytosol	55.82	40.88
CDX90553	Canola	cytosol	53.41	40.8
CDY09727	Canola	cytosol	53.41	40.67
CDY27752	Canola	cytosol	55.42	40.59
CDY09722	Canola	cytosol	52.21	39.51
CDX90550	Canola	cytosol	52.21	39.39
CDY57860	Canola	cytosol	46.59	38.16
CDY48181	Canola	peroxisome	48.19	37.62
CDY33304	Canola	peroxisome	42.97	33.02
CDY26530	Canola	peroxisome	42.97	33.02
CDX77051	Canola	cytosol	20.08	30.49
CDX77971	Canola	cytosol, peroxisome, plastid	39.36	30.25
CDX90672	Canola	mitochondrion	42.57	22.22
CDX73754	Canola	cytosol, peroxisome, plastid	14.86	21.64
Zm00001d012908_P001	Maize	peroxisome	8.84	21.57
CDY28994	Canola	mitochondrion	42.57	14.7
CDX90673	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY50393	EnsemblPlantsGene:GSBRNA2T00096615001	Gene3D:3.40.50.1820	GO:A0A078IMZ1	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF13	PRINTS:PR00412
ProteinID:CDY50393	ProteinID:CDY50393.1	SUPFAM:SSF53474	UniParc:UPI0004EE6C50	UniProt:A0A078IMZ1	MapMan:35.2

Description

BnaCnng19250DBnaCnng19250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMZ1]

Coordinates

chrLK032905:-:91776..94274

Molecular Weight (calculated)

28471.3 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.220

Length

249 amino acids

Sequence
(BLAST)

001: MERIEHTTVS TNGINMHVAS IGSGPVILFL HGFPDLCHHR VVDVCMIRPD RVKALVNMSV EFHPRNPSVK TVDAFKALFG EDYYICRFQE PGDIEEDFAL
101: VDMKKLVNGF FTSHNTRPPC IPKSVFKYLP DPPALPAWFT EQDVCFYADK FSQKGFTGGL NYYRAMNLSW ELTAPWDGLQ IKVPVKYITG DLDPTYHIPG
201: TKEYIHDGGL KKHVPFLQEV VVMEGVGHFL QQEKPKEITD HIYGFFKKF

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.