CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036841.1-P	Field mustard	peroxisome	96.3	97.81
CDX73754	Canola	cytosol, peroxisome, plastid	47.22	89.47
CDY33304	Canola	peroxisome	83.95	83.95
CDY26530	Canola	peroxisome	83.95	83.95
KRH69845	Soybean	cytosol	63.89	63.3
KRH08141	Soybean	cytosol	62.35	61.77
VIT_04s0023g02610.t01	Wine grape	golgi, mitochondrion, peroxisome	59.26	60.38
Os12t0636400-01	Rice	cytosol, peroxisome	52.78	52.78
TraesCS5D01G065000.1	Wheat	cytosol	52.16	51.84
OQU79732	Sorghum	cytosol	51.23	51.39
CDX90672	Canola	mitochondrion	74.38	50.52
TraesCS6A01G029300.1	Wheat	cytosol	50.93	50.46
Zm00001d041217_P002	Maize	extracellular	50.31	50.31
Zm00001d031203_P001	Maize	cytosol	50.93	50.15
TraesCS5A01G053600.1	Wheat	cytosol	51.54	49.7
EES17493	Sorghum	cytosol	49.38	49.08
CDX77051	Canola	cytosol	24.07	47.56
Zm00001d031204_P003	Maize	cytosol	50.0	47.51
HORVU6Hr1G005400.4	Barley	cytosol, peroxisome, plastid	51.54	46.01
CDY05187	Canola	cytosol	47.22	45.0
CDY50394	Canola	peroxisome	43.52	44.62
CDY65636	Canola	peroxisome	43.52	44.62
CDY65635	Canola	cytosol	43.21	44.44
CDY27752	Canola	cytosol	45.99	43.82
CDY48181	Canola	peroxisome	40.74	41.38
CDY09722	Canola	cytosol	41.36	40.73
CDX90550	Canola	cytosol	40.74	40.0
CDX90553	Canola	cytosol	40.12	39.88
CDY50393	Canola	cytosol	30.25	39.36
CDY57860	Canola	cytosol	36.73	39.14
CDY09727	Canola	cytosol	39.51	39.14
CDX77049	Canola	peroxisome	16.98	33.54
CDX77050	Canola	peroxisome	16.98	33.54
CDY28994	Canola	mitochondrion	73.77	33.15
HORVU5Hr1G012890.5	Barley	plastid	32.41	32.11
GSMUA_Achr5P19790_001	Banana	peroxisome	4.01	26.53
CDX90673	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX77971	EnsemblPlantsGene:GSBRNA2T00129235001	Gene3D:3.40.50.1820	GO:A0A078CL91	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43689	PANTHER:PTHR43689:SF5
PFAM:PF00561	PRINTS:PR00412	ProteinID:CDX77971	ProteinID:CDX77971.1	SUPFAM:SSF53474	UniParc:UPI0004EE7E84
MapMan:35.2	:	:	:	:	:

Description

BnaA09g31660D

Coordinates

chrLK031814:-:346715..348242

Molecular Weight (calculated)

36842.7 Da

IEP (calculated)

5.529

GRAVY (calculated)

-0.295

Length

324 amino acids

Sequence
(BLAST)

001: MAREVREQRI KTNGIWLNVA EKGDNGGPLV LLLHGFPETW FSWRHQIDFL SSHGYHVVAP DLRGYADSDS PPSHESYTVS HLVADVIGLL DHYGTAQAFV
101: AGHDWGATIG WSLCLFRPDL VKGFISLSVP YFPRHPNLKP LEFFKSFGDG LYISQFQKPG RAEAAFAKHD ILTVIKKFLL TTRTDYLVAP PDTEIINDLE
201: IPSTIPDWIT DDELQVYADK FQKSGFTGPL NYYRAMDLNW EIMAPWQDSK IVVPTMFIFG DKDNGNEGEH GKMQYVKGEM FKSLVPNLEI IVIEDGHHYI
301: QQEKSKRVSE EMLSFFNKLG NTSE

Best Arabidopsis Sequence Match ( AT3G51000.1 )
(BLAST)

001: MTSSVREKKI KTNGIWLNVA EKGDEEGPLV LLLHGFPETW YSWRHQIDFL SSHGYHVVAP DLRGYGDSDS LPSHESYTVS HLVADVIGLL DHYGTTQAFV
101: AGHDWGAIIG WCLCLFRPDR VKGFISLSVP YFPRDPKLKP SDFFKIFGDG LYITQFQKPG RAEAAFAKHD CLSVMKKFLL ITRTDYLVAP PDTEIIDHLE
201: IPSTIPDWIT EEEIQVYAEK FQRSGFTGPL NYYRSMDMNW EILAPWQDSK IVVPTKFIAG DKDIGYEGPN GTMEYVKGEV FKIVVPNLEI VVIEGGHHFI
301: QQEKSEQVSQ EILSFLNKLS KTE

Arabidopsis Description

AT3g51000/F24M12_40 [Source:UniProtKB/TrEMBL;Acc:Q9SD45]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.