Factsheet for TraesCS7D01G224000.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G128800.1	Wheat	cytosol	97.52	97.52
TraesCS7A01G222400.1	Wheat	cytosol	88.2	93.73
HORVU7Hr1G045620.2	Barley	cytosol, mitochondrion, peroxisome	42.55	88.96
TraesCS7D01G228900.1	Wheat	cytosol	81.99	85.71
TraesCS7D01G224200.1	Wheat	golgi, unclear	85.4	78.35
Os05t0273800-01	Rice	cytosol, peroxisome, plastid	73.6	71.6
CDX77051	Canola	cytosol	32.61	64.02
EES17023	Sorghum	extracellular, plastid, vacuole	74.22	63.9
GSMUA_Achr8P22510_001	Banana	peroxisome	52.8	62.27
Zm00001d023651_P001	Maize	extracellular	75.47	61.21
KRG96457	Soybean	nucleus	58.39	59.31
VIT_14s0060g01940.t01	Wine grape	cytosol	57.45	58.36
VIT_05s0077g01990.t01	Wine grape	cytoskeleton, cytosol, peroxisome	57.45	58.36
KRH68486	Soybean	cytosol	56.83	57.91
PGSC0003DMT400063718	Potato	cytosol	56.21	57.64
TraesCS3D01G180600.1	Wheat	peroxisome	57.14	57.14
VIT_05s0077g02020.t01	Wine grape	cytosol	56.21	57.1
AT2G26740.1	Thale cress	cytosol	56.83	57.01
PGSC0003DMT400046206	Potato	peroxisome	56.21	56.92
VIT_05s0077g02010.t01	Wine grape	cytosol	55.9	56.78
Solyc01g099910.2.1	Tomato	cytosol	55.28	56.69
Solyc06g009170.2.1	Tomato	extracellular	55.9	56.6
VIT_07s0005g00700.t01	Wine grape	cytosol	55.59	56.47
KRG96773	Soybean	nucleus	55.28	56.33
PGSC0003DMT400029422	Potato	cytosol	56.83	56.31
PGSC0003DMT400081311	Potato	cytosol	55.59	56.29
KRG92916	Soybean	nucleus	56.21	56.21
KRG96774	Soybean	nucleus	55.28	55.97
CDY48181	Canola	peroxisome	54.97	55.49
Bra034309.1-P	Field mustard	peroxisome	54.97	55.49
KRH68487	Soybean	cytosol	54.66	55.35
Solyc09g075300.2.1	Tomato	cytosol	54.66	55.35
KRH50813	Soybean	cytosol	36.96	55.09
AT2G26750.1	Thale cress	cytosol	54.35	54.69
KRG96771	Soybean	nucleus	57.45	54.25
Solyc12g099430.1.1	Tomato	cytosol	54.04	53.87
PGSC0003DMT400011790	Potato	cytosol	54.04	53.87
Solyc05g054350.2.1	Tomato	plastid	53.42	53.58
PGSC0003DMT400060250	Potato	cytosol	53.42	53.58
KRG96772	Soybean	nucleus	55.9	53.41
Solyc01g066470.2.1	Tomato	cytosol, peroxisome	32.3	53.33
Solyc01g066460.2.1	Tomato	cytosol, peroxisome	32.3	53.33
TraesCS5D01G507000.1	Wheat	peroxisome	54.97	53.15
Solyc05g054320.2.1	Tomato	cytosol	52.8	52.96
PGSC0003DMT400060254	Potato	extracellular	52.48	52.65
KRH02278	Soybean	cytosol	56.83	51.69
KRH68206	Soybean	peroxisome	47.83	50.99
PGSC0003DMT400029420	Potato	cytosol	52.8	50.9
Solyc01g066450.2.1	Tomato	cytosol	52.8	50.75
TraesCS5D01G065000.1	Wheat	cytosol	50.31	49.69
TraesCS3D01G545700.1	Wheat	cytosol, peroxisome, plastid	49.69	48.93
VIT_05s0077g02000.t01	Wine grape	cytosol, mitochondrion, peroxisome	28.88	48.69
TraesCS1D01G048000.1	Wheat	cytosol, peroxisome, plastid	50.62	48.66
TraesCS5D01G507300.1	Wheat	cytosol, peroxisome, plastid	51.55	48.26
TraesCS3D01G074100.1	Wheat	cytosol, peroxisome, plasma membrane	47.83	47.68
CDX77050	Canola	peroxisome	23.91	46.95
CDX77049	Canola	peroxisome	23.91	46.95
VIT_05s0077g02030.t01	Wine grape	mitochondrion	12.73	43.62
TraesCS5D01G507100.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	23.29	38.86
TraesCS1D01G168400.1	Wheat	cytosol, peroxisome, plastid	35.71	36.98
TraesCS1D01G168300.4	Wheat	peroxisome	34.78	35.0
TraesCS2D01G529300.1	Wheat	peroxisome	32.3	33.88

Protein Annotations

EnsemblPlants:TraesCS7D01G224000.1	EnsemblPlantsGene:TraesCS7D01G224000	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF13	PFAM:PF00561
PRINTS:PR00111	PRINTS:PR00412	SEG:seg	SUPFAM:SSF53474	MapMan:35.2	:

Description

No Description!

Coordinates

chr7D:-:184586570..184588565

Molecular Weight (calculated)

35452.6 Da

IEP (calculated)

5.203

GRAVY (calculated)

0.040

Length

322 amino acids

Sequence
(BLAST)

001: MASDGVITHR SVEVNGVRLH VAEAGPAGAP VVLLLHGFPE LWYTWRHQMP ALAAAGYRAV APDMPGYGDS EAPSAGPDQY TALHIVGDFV ALIDSLGQER
101: VFVVGHDWGA IIAWSLCLFR PDRVKALVPL SVPFIPRSPA VKPVDAVRAL YGDDFYICSF QEPGAIEAEF KRLGTELVLR KFFADRTPGP LFIPKSGWGS
201: PDDEVPLPSW ITEEDVKYYT TQLDKSGFTG GLNYYRALNK TWELTSPWTG AEIMVPTKFT VGDLDLTYNI AGAKLFINKG GLKKFVPLLD DVVIMKDVGH
301: FINEEKPEEI SALIIGFIKK FN

Best Arabidopsis Sequence Match ( AT4G02340.1 )
(BLAST)

001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL

Arabidopsis Description

AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.