Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G186600.1 | Wheat | cytosol, peroxisome, plastid | 98.07 | 98.07 |
| TraesCS1A01G170700.1 | Wheat | cytosol, peroxisome, plastid | 97.11 | 97.11 |
| HORVU1Hr1G044770.1 | Barley | cytosol, peroxisome | 97.11 | 96.79 |
| TraesCS2D01G529300.1 | Wheat | peroxisome | 73.63 | 74.59 |
| TraesCS1D01G168300.4 | Wheat | peroxisome | 75.24 | 73.12 |
| GSMUA_Achr8P14130_001 | Banana | cytosol | 67.52 | 65.02 |
| KRH25591 | Soybean | cytosol | 58.84 | 58.28 |
| KRH22405 | Soybean | cytoskeleton, cytosol, peroxisome | 58.2 | 58.2 |
| Solyc02g078570.2.1 | Tomato | extracellular | 58.84 | 58.1 |
| VIT_12s0059g00230.t01 | Wine grape | cytosol, peroxisome, vacuole | 58.2 | 57.83 |
| KRH55995 | Soybean | nucleus | 58.52 | 57.78 |
| VIT_12s0059g00210.t01 | Wine grape | peroxisome | 57.56 | 57.19 |
| PGSC0003DMT400055784 | Potato | cytosol, peroxisome, plastid | 56.91 | 56.91 |
| KRH55994 | Soybean | cytosol | 57.23 | 56.69 |
| VIT_12s0059g00220.t01 | Wine grape | peroxisome | 56.91 | 56.55 |
| KRH25546 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 59.16 | 54.28 |
| KRH26931 | Soybean | cytoskeleton, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 48.55 | 54.12 |
| KRH25547 | Soybean | cytosol | 23.15 | 48.0 |
| KRH37569 | Soybean | cytosol | 27.01 | 46.41 |
| KRH25548 | Soybean | cytosol | 24.76 | 43.75 |
| KRG94755 | Soybean | cytosol, peroxisome, plastid | 38.91 | 41.58 |
| TraesCS5D01G065000.1 | Wheat | cytosol | 41.16 | 39.26 |
| TraesCS7D01G224000.1 | Wheat | unclear | 36.98 | 35.71 |
| TraesCS7D01G228900.1 | Wheat | cytosol | 35.37 | 35.71 |
| TraesCS7D01G224200.1 | Wheat | golgi, unclear | 37.94 | 33.62 |
| TraesCS1D01G048000.1 | Wheat | cytosol, peroxisome, plastid | 35.05 | 32.54 |
| TraesCS3D01G545700.1 | Wheat | cytosol, peroxisome, plastid | 33.76 | 32.11 |
| TraesCS3D01G180600.1 | Wheat | peroxisome | 32.8 | 31.68 |
| TraesCS5D01G507000.1 | Wheat | peroxisome | 33.12 | 30.93 |
| TraesCS5D01G507300.1 | Wheat | cytosol, peroxisome, plastid | 33.76 | 30.52 |
| TraesCS3D01G074100.1 | Wheat | cytosol, peroxisome, plasma membrane | 30.23 | 29.1 |
| TraesCS5D01G507100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 14.79 | 23.83 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G168400.1 | EnsemblPlantsGene:TraesCS1D01G168400 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF3 | PFAM:PF00561 |
| PRINTS:PR00111 | PRINTS:PR00412 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1D:-:240598199..240599454
Molecular Weight (calculated)
35593.8 Da
IEP (calculated)
5.077
GRAVY (calculated)
-0.176
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQQIEHSHL LVRGLNLHLA QVGKDELGTV VFLHGFPEIW YTWRHQMLAV AAAGYRAIAP DSRGYGLSDQ PPEDVEATWE DLVADVLAIL DALSIQKVFL
101: VGKDYGAMPA YDFALRHPDR TRGVMCMGIP FSPGPFNFDT MPEGFYILRW REPDRAEADF GRHDVRRVVR TIYILFSRSD VPIAEEGQEI MDLADLSTPL
201: PPWFTEEDLD AYAALYEKSG FRYPLQIPYR ALHRMTKHVD PKFQVPVFMV MGEKDYCFKF PGFETAMRSG VMKTFAPDLK ITYIPEGCHF VQEQFPDQIN
301: DLLLGFLKDH P
101: VGKDYGAMPA YDFALRHPDR TRGVMCMGIP FSPGPFNFDT MPEGFYILRW REPDRAEADF GRHDVRRVVR TIYILFSRSD VPIAEEGQEI MDLADLSTPL
201: PPWFTEEDLD AYAALYEKSG FRYPLQIPYR ALHRMTKHVD PKFQVPVFMV MGEKDYCFKF PGFETAMRSG VMKTFAPDLK ITYIPEGCHF VQEQFPDQIN
301: DLLLGFLKDH P
001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
Arabidopsis Description
ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.