Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G366100.1 | Wheat | peroxisome | 97.3 | 96.72 |
| TraesCS5B01G507200.1 | Wheat | peroxisome | 93.39 | 92.84 |
| Zm00001d034740_P001 | Maize | mitochondrion | 81.68 | 82.18 |
| Os03t0829100-01 | Rice | peroxisome | 81.68 | 81.68 |
| HORVU7Hr1G075860.1 | Barley | mitochondrion | 14.71 | 68.06 |
| OQU90681 | Sorghum | peroxisome | 82.28 | 66.5 |
| TraesCS3D01G545700.1 | Wheat | cytosol, peroxisome, plastid | 59.16 | 60.24 |
| TraesCS5D01G507300.1 | Wheat | cytosol, peroxisome, plastid | 60.36 | 58.43 |
| TraesCS1D01G048000.1 | Wheat | cytosol, peroxisome, plastid | 58.26 | 57.91 |
| TraesCS3D01G180600.1 | Wheat | peroxisome | 55.26 | 57.14 |
| TraesCS7D01G228900.1 | Wheat | cytosol | 52.55 | 56.82 |
| TraesCS7D01G224000.1 | Wheat | unclear | 53.15 | 54.97 |
| TraesCS3D01G074100.1 | Wheat | cytosol, peroxisome, plasma membrane | 53.15 | 54.8 |
| TraesCS7D01G224200.1 | Wheat | golgi, unclear | 54.65 | 51.85 |
| TraesCS5D01G507100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 28.83 | 49.74 |
| TraesCS5D01G065000.1 | Wheat | cytosol | 47.45 | 48.47 |
| TraesCS1D01G168400.1 | Wheat | cytosol, peroxisome, plastid | 30.93 | 33.12 |
| TraesCS1D01G168300.4 | Wheat | peroxisome | 30.93 | 32.19 |
| TraesCS2D01G529300.1 | Wheat | peroxisome | 29.13 | 31.6 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G507000.1 | EnsemblPlantsGene:TraesCS5D01G507000 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | InterPro:AB_hydrolase |
| InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | InterPro:IPR029058 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF23 | PFAM:PF00561 |
| PRINTS:PR00111 | PRINTS:PR00412 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5D:-:532556322..532558601
Molecular Weight (calculated)
37237.7 Da
IEP (calculated)
8.542
GRAVY (calculated)
-0.145
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAPEIRH RQVEANGITM HVAEAGPASA AALAVLFVHG FPELWYSWRH QMEHLAARGY RCVAPDLRGY GGTSVPPDPA SYTAFHVVGD LVALLDALRL
101: RQVFVVGHDW GAIVSWNLCL LRPDRVRALV NLSVAFNPRH PSAKPLDYFR RAYGDDYYVC KFQEPGYEAQ FASLDLKRFF KMAITVQTTG SSAMSLKKMQ
201: SSNKQITLPS WLSEEDVSYL ASVYAKTGFA GGLNYYRCLD LNWELMAPWT GAKVQVPTKF IVGDGDLAYH HPGVKGYIHK GGLKRDVPML DEVVVIKGAG
301: HFIQQERAQE ISEHIYEYIK KFSTDPTREL SKL
101: RQVFVVGHDW GAIVSWNLCL LRPDRVRALV NLSVAFNPRH PSAKPLDYFR RAYGDDYYVC KFQEPGYEAQ FASLDLKRFF KMAITVQTTG SSAMSLKKMQ
201: SSNKQITLPS WLSEEDVSYL ASVYAKTGFA GGLNYYRCLD LNWELMAPWT GAKVQVPTKF IVGDGDLAYH HPGVKGYIHK GGLKRDVPML DEVVVIKGAG
301: HFIQQERAQE ISEHIYEYIK KFSTDPTREL SKL
001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F
Arabidopsis Description
ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.