Factsheet for Zm00001d034740_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G366100.1	Wheat	peroxisome	82.78	81.79
TraesCS5D01G507000.1	Wheat	peroxisome	82.18	81.68
Os03t0829100-01	Rice	peroxisome	79.46	78.98
TraesCS5B01G507200.1	Wheat	peroxisome	79.46	78.51
OQU90681	Sorghum	peroxisome	93.96	75.49
Zm00001d012908_P001	Maize	peroxisome	21.75	70.59
HORVU7Hr1G075860.1	Barley	mitochondrion	13.9	63.89
Zm00001d012909_P001	Maize	extracellular	60.42	60.42
Zm00001d012907_P001	Maize	peroxisome	26.89	54.6
Zm00001d040290_P001	Maize	peroxisome	56.19	52.25
Zm00001d031204_P003	Maize	cytosol	47.43	46.04
Zm00001d041217_P002	Maize	extracellular	44.41	45.37
Zm00001d023651_P001	Maize	extracellular	53.78	44.84
Zm00001d031203_P001	Maize	cytosol	44.11	44.38
Zm00001d032570_P002	Maize	cytosol	32.63	33.86
Zm00001d013934_P001	Maize	extracellular	30.51	32.06

Protein Annotations

EMBL:BT038929	EnsemblPlants:Zm00001d034740_P001	EnsemblPlants:Zm00001d034740_T001	EnsemblPlantsGene:Zm00001d034740	Gene3D:3.40.50.1820	GO:GO:0003674
GO:GO:0003824	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058
PANTHER:PTHR43329	PANTHER:PTHR43329:SF23	PFAM:PF00561	PRINTS:PR00111	PRINTS:PR00412	ProteinID:ONM11127.1
SUPFAM:SSF53474	UniParc:UPI000160BA5B	UniProt:B4FP91	MapMan:35.2	:	:

Description

soluble epoxide hydrolase

Coordinates

chr1:-:301042431..301052478

Molecular Weight (calculated)

37167.9 Da

IEP (calculated)

8.213

GRAVY (calculated)

-0.051

Length

331 amino acids

Sequence
(BLAST)

001: MAAVRHRQLE ANGITMHVAE AGPVNASAPA VLFVHGFPEL WYSWRHQMGY LAARGYRCVA PDLRGYGGTT APPEPNSYTV FHIVGDIVAL LDALHLPQVF
101: VVGHDWGAIV SWNLCLLRPD RVRALVNLSV AFMPRRPGVK PLEYFRAAYG DEYYVCRFQE PGLEAEFATF DLKSFFTLAL TLRATGSSAM DLRKMQTYSK
201: QMVLPSWLSE EDVSYLASVY SKTGFAGGVN YYRCLDLNWE LMAPWTGAKV QVPTKFIVGD GDLAYHHPGV KRYIHKGGFK RDVPMLEEVV VIKGAGHFIQ
301: QERAQEISEH IHDYIKKFEA CGLPPLRVSK L

Best Arabidopsis Sequence Match ( AT4G02340.1 )
(BLAST)

001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL

Arabidopsis Description

AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.