Factsheet for Zm00001d012909_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012908_P001	Maize	peroxisome	29.31	95.1
Zm00001d012907_P001	Maize	peroxisome	45.62	92.64
EER90578	Sorghum	cytosol, peroxisome, plastid	45.02	88.17
TraesCS4A01G366000.1	Wheat	peroxisome	77.04	74.13
TraesCS5D01G507300.1	Wheat	cytosol, peroxisome, plastid	77.04	74.13
TraesCS5B01G507300.1	Wheat	peroxisome	75.83	72.54
Os03t0829200-01	Rice	cytosol, peroxisome, plastid	72.81	71.3
TraesCS5D01G507100.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	40.79	69.95
HORVU5Hr1G115720.9	Barley	peroxisome	76.44	68.56
Zm00001d034740_P001	Maize	mitochondrion	60.42	60.42
Zm00001d040290_P001	Maize	peroxisome	52.57	48.88
Zm00001d041217_P002	Maize	extracellular	45.92	46.91
Zm00001d031203_P001	Maize	cytosol	45.02	45.29
Zm00001d023651_P001	Maize	extracellular	53.47	44.58
Zm00001d031204_P003	Maize	cytosol	45.62	44.28
HORVU7Hr1G042520.1	Barley	cytosol	17.52	36.94
Zm00001d032570_P002	Maize	cytosol	33.23	34.48
Zm00001d013934_P001	Maize	extracellular	31.72	33.33
HORVU5Hr1G115780.1	Barley	peroxisome	29.91	30.56

Protein Annotations

EMBL:BT067532	EnsemblPlants:Zm00001d012909_P001	EnsemblPlants:Zm00001d012909_T001	EnsemblPlantsGene:Zm00001d012909	EntrezGene:100191966	Gene3D:3.40.50.1820
GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like
InterPro:IPR029058	PANTHER:PTHR43329	PANTHER:PTHR43329:SF23	PFAM:PF00561	PRINTS:PR00412	ProteinID:AQK61795.1
SEG:seg	SUPFAM:SSF53474	UniParc:UPI000195CAAA	UniProt:C0PGW3	MapMan:35.2	:

Description

soluble epoxide hydrolase

Coordinates

chr5:-:1879412..1882842

Molecular Weight (calculated)

36518.1 Da

IEP (calculated)

5.821

GRAVY (calculated)

-0.086

Length

331 amino acids

Sequence
(BLAST)

001: MEAAAAAVLH RTVEANGISM HVAESGPDGD GAPAVVFLHG FPELWYSWRH QMAHLAARGY RCVAPDLRGY GGTAAPPDVA SYSAFHVVGD VVALLDALGI
101: HNKVFVVGHD WGAIIAWYLC LFRPDRVAAL VNTSVAFMRH IFVRAAAAAV TPIDYFHRTY GPTYYICRFQ EPGVAEKEFS PANAGYLMKR ILCNRFTSSA
201: AGDDKRPPAD AAEEEPLPPW LTEEDVGHFA SEFERTGFTG PINYYRNMDR NWELAAPWAD AKVRVPTRFI VGDGDLTYHY PGIQDYIHKG GFEADVPGLE
301: SVVVIPGAGH FVQQEKADEV SQHIYDFISK F

Best Arabidopsis Sequence Match ( AT2G26740.1 )
(BLAST)

001: MEHRKVRGNG IDIHVAIQGP SDGPIVLLLH GFPELWYSWR HQIPGLAARG YRAVAPDLRG YGDSDAPAEI SSYTCFNIVG DLIAVISALT ASEDEKVFVV
101: GHDWGALIAW YLCLFRPDRV KALVNLSVPF SFRPTDPSVK PVDRMRAFYG DDYYICRFQE FGDVEAEIAE VGTERVMKRL LTYRTPGPVI IPKDKSFWGS
201: KGETIPLPSW LTEEDVAYFV SKFEEKGFSG PVNYYRNFNR NNELLGPWVG SKIQVPTKFV IGELDLVYYM PGVKEYIHGP QFKEDVPLLE EPVVMEGVAH
301: FINQEKPQEI LQIILDFISK F

Arabidopsis Description

ATSEHATsEH [Source:UniProtKB/TrEMBL;Acc:Q42566]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.