Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||
---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G507100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 23.15 | 38.86 |
TraesCS5B01G507300.1 | Wheat | peroxisome | 34.88 | 32.66 |
TraesCS5D01G507300.1 | Wheat | cytosol, peroxisome, plastid | 34.57 | 32.56 |
TraesCS4A01G366000.1 | Wheat | peroxisome | 34.26 | 32.27 |
HORVU5Hr1G115720.9 | Barley | peroxisome | 34.26 | 30.08 |
Zm00001d012909_P001 | Maize | extracellular | 30.56 | 29.91 |
Os03t0829200-01 | Rice | cytosol, peroxisome, plastid | 29.32 | 28.11 |
HORVU7Hr1G075860.1 | Barley | mitochondrion | 5.86 | 26.39 |
HORVU7Hr1G045620.2 | Barley | cytosol, mitochondrion, peroxisome | 12.35 | 25.97 |
HORVU3Hr1G070830.1 | Barley | cytosol, peroxisome | 13.27 | 24.71 |
HORVU7Hr1G045640.2 | Barley | plastid | 26.54 | 24.43 |
HORVU3Hr1G035400.1 | Barley | plastid | 28.09 | 22.47 |
HORVU3Hr1G070810.3 | Barley | cytosol, peroxisome | 7.1 | 22.33 |
EER90578 | Sorghum | cytosol, peroxisome, plastid | 11.42 | 21.89 |
HORVU6Hr1G005400.4 | Barley | cytosol, peroxisome, plastid | 23.46 | 20.94 |
HORVU1Hr1G044770.1 | Barley | cytosol, peroxisome | 16.05 | 16.67 |
HORVU2Hr1G116250.4 | Barley | peroxisome | 13.58 | 15.17 |
HORVU5Hr1G012890.5 | Barley | plastid | 15.12 | 14.98 |
HORVU5Hr1G115800.1 | Barley | peroxisome | 10.8 | 13.36 |
HORVU2Hr1G116180.3 | Barley | peroxisome | 9.26 | 13.27 |
HORVU1Hr1G044740.2 | Barley | plastid | 15.43 | 12.79 |
HORVU7Hr1G042520.1 | Barley | cytosol | 6.17 | 12.74 |
HORVU1Hr1G009090.4 | Barley | peroxisome | 7.41 | 10.17 |
Protein Annotations
EnsemblPlants:HORVU5Hr1G115780.1 | EnsemblPlantsGene:HORVU5Hr1G115780 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:IPR029058 | PANTHER:PTHR43329 |
PANTHER:PTHR43329:SF23 | SEG:seg | SUPFAM:SSF53474 | UniParc:UPI000B46463D | UniProt:A0A287SUK9 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr5H:+:647274109..647278226
Molecular Weight (calculated)
34582.2 Da
IEP (calculated)
12.302
GRAVY (calculated)
-0.913
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: GGGGDQAQDG DGERDRDARG GVGAGVGAGG AVPARLPGAV VLVAAPDGAP RRAGLPVRGA TXPRLRRHGG AGRRRVLHRL PRRRRRRRAA RRPRHPQGVR
101: GGSRLGRHHR VVPVPLPAGP GDGARQHQRR LHAPRLHPRR RRRRQDHRLL QPSLRPDLLH LPLPGARGGG EGVRAGAREA PHDAHPERPL QRARGRQGDD
201: GGRHRRGGGA PGVAHGGGHR LLRGGVREDG LHGRHQLLPQ HGPELGAGGA VGGRQGDGAD QVHRGDGDLT YHYAGIQDYL HKGGLKADVP LLEELVVVPG
301: AGHFIQQERA QEVSNHIYDF ISKF
101: GGSRLGRHHR VVPVPLPAGP GDGARQHQRR LHAPRLHPRR RRRRQDHRLL QPSLRPDLLH LPLPGARGGG EGVRAGAREA PHDAHPERPL QRARGRQGDD
201: GGRHRRGGGA PGVAHGGGHR LLRGGVREDG LHGRHQLLPQ HGPELGAGGA VGGRQGDGAD QVHRGDGDLT YHYAGIQDYL HKGGLKADVP LLEELVVVPG
301: AGHFIQQERA QEVSNHIYDF ISKF
001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
Arabidopsis Description
AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.