Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
22364583
extracellular: 22892874 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400046206 | Potato | peroxisome | 98.43 | 98.43 |
| VIT_07s0005g00700.t01 | Wine grape | cytosol | 76.73 | 76.97 |
| KRG96457 | Soybean | nucleus | 76.1 | 76.34 |
| Solyc09g075300.2.1 | Tomato | cytosol | 69.18 | 69.18 |
| GSMUA_Achr8P10290_001 | Banana | cytosol | 69.18 | 68.97 |
| KRH68206 | Soybean | peroxisome | 63.84 | 67.22 |
| GSMUA_Achr3P08130_001 | Banana | cytosol | 65.41 | 65.62 |
| GSMUA_AchrUn_... | Banana | peroxisome | 64.47 | 64.67 |
| Solyc01g099910.2.1 | Tomato | cytosol | 63.52 | 64.33 |
| Solyc12g099430.1.1 | Tomato | cytosol | 62.58 | 61.61 |
| Solyc05g054320.2.1 | Tomato | cytosol | 61.95 | 61.37 |
| Solyc05g054350.2.1 | Tomato | plastid | 61.32 | 60.75 |
| GSMUA_Achr8P22510_001 | Banana | peroxisome | 51.89 | 60.44 |
| Os01t0255000-01 | Rice | cytosol | 60.38 | 59.63 |
| EES00506 | Sorghum | cytosol | 60.06 | 58.77 |
| Solyc01g066460.2.1 | Tomato | cytosol, peroxisome | 35.85 | 58.46 |
| TraesCS7A01G225600.1 | Wheat | cytosol | 58.8 | 58.07 |
| TraesCS3B01G204900.1 | Wheat | peroxisome | 58.18 | 57.45 |
| TraesCS3D01G180600.1 | Wheat | peroxisome | 57.86 | 57.14 |
| Solyc01g066470.2.1 | Tomato | cytosol, peroxisome | 34.91 | 56.92 |
| TraesCS7B01G129100.1 | Wheat | cytosol | 57.55 | 56.83 |
| TraesCS7D01G228900.1 | Wheat | cytosol | 55.03 | 56.82 |
| TraesCS3A01G175200.2 | Wheat | peroxisome | 57.23 | 56.52 |
| TraesCS7A01G222400.1 | Wheat | cytosol | 53.77 | 56.44 |
| HORVU3Hr1G070810.3 | Barley | cytosol, peroxisome | 18.24 | 56.31 |
| Os01t0255100-01 | Rice | cytosol | 57.23 | 56.17 |
| TraesCS7B01G194000.1 | Wheat | cytosol | 56.92 | 56.04 |
| TraesCS7D01G224000.1 | Wheat | unclear | 56.6 | 55.9 |
| Os05t0273800-01 | Rice | cytosol, peroxisome, plastid | 57.55 | 55.29 |
| TraesCS7B01G128800.1 | Wheat | cytosol | 55.97 | 55.28 |
| TraesCS7B01G128900.1 | Wheat | unclear | 55.35 | 54.66 |
| HORVU7Hr1G045620.2 | Barley | cytosol, mitochondrion, peroxisome | 26.42 | 54.55 |
| Solyc01g066450.2.1 | Tomato | cytosol | 57.23 | 54.33 |
| HORVU3Hr1G070830.1 | Barley | cytosol, peroxisome | 29.56 | 54.02 |
| Zm00001d012908_P001 | Maize | peroxisome | 16.98 | 52.94 |
| TraesCS7D01G224200.1 | Wheat | golgi, unclear | 57.86 | 52.42 |
| HORVU7Hr1G045640.2 | Barley | plastid | 57.86 | 52.27 |
| TraesCS7A01G222600.1 | Wheat | golgi, unclear | 57.23 | 51.7 |
| EES17023 | Sorghum | extracellular, plastid, vacuole | 55.03 | 46.79 |
| HORVU3Hr1G035400.1 | Barley | plastid | 58.49 | 45.93 |
| Zm00001d012907_P001 | Maize | peroxisome | 23.27 | 45.4 |
| Solyc02g078570.2.1 | Tomato | extracellular | 37.11 | 37.46 |
| GSMUA_Achr3P24120_001 | Banana | cytosol | 63.21 | 31.7 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | InterPro:Epox_hydrolase-like | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 |
| InterPro:IPR029058 | UniProt:K4C3U7 | PFAM:PF00561 | PRINTS:PR00111 | PRINTS:PR00412 | PANTHER:PTHR43329 |
| PANTHER:PTHR43329:SF13 | SUPFAM:SSF53474 | EnsemblPlantsGene:Solyc06g009170.2 | EnsemblPlants:Solyc06g009170.2.1 | UniParc:UPI0002766CCE | SEG:seg |
Description
No Description!
Coordinates
chr6:+:3108490..3113302
Molecular Weight (calculated)
36211.4 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.209
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MENIQHKNLT VNGINMHIAE IGEGPSTILF LHGFPELWYS WRHQLISLSS KGYRAIAPDL RGYGDTDSPP SPSSYTVFHI VGDLIALLDA LGLDQVFLVG
101: HDWGAVIAWH VCLLRPDRIK ALVNMSVVFH PRNPKRKPIE SMRAVLGDDY YICRFQEYGE AEEEFARVDT ARLIAKFLTS RNPAPLRVPK EKGFGGSPHT
201: PITLPSWLSE EDVNYYANKF RQSGFTGGLN YYRAMDLNWE LTAPWTGVQI KVPVKFIVGD VDLTYNTPGV KEYIHKGGFQ KVVPFLQEVV IMEGVAHFIN
301: QERPEEINDH IYDFFQKF
101: HDWGAVIAWH VCLLRPDRIK ALVNMSVVFH PRNPKRKPIE SMRAVLGDDY YICRFQEYGE AEEEFARVDT ARLIAKFLTS RNPAPLRVPK EKGFGGSPHT
201: PITLPSWLSE EDVNYYANKF RQSGFTGGLN YYRAMDLNWE LTAPWTGVQI KVPVKFIVGD VDLTYNTPGV KEYIHKGGFQ KVVPFLQEVV IMEGVAHFIN
301: QERPEEINDH IYDFFQKF
001: MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
101: DWGAIVAWWL CMIRPDRVNA LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR NPRPPCIPKS VGFRGLPDPP
201: SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE
301: KPDEVTDHIY GFFKKFRTRE TASL
Arabidopsis Description
AT4g02340 protein [Source:UniProtKB/TrEMBL;Acc:O81299]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.