Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra025379.1-P | |
| Bra033088.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G44670.1 | Bra025379.1-P | AT3G29160.1 | 21798944 |
| AT2G44670.1 | Bra033088.1-P | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30481 | Canola | nucleus | 100.0 | 100.0 |
| Bra000358.1-P | Field mustard | nucleus | 87.23 | 87.23 |
| Bra004855.1-P | Field mustard | cytosol | 84.04 | 86.81 |
| AT2G44670.1 | Thale cress | cytosol, nucleus, plastid | 84.04 | 84.95 |
| Bra007517.1-P | Field mustard | cytosol | 61.7 | 65.91 |
| VIT_15s0021g00940.t01 | Wine grape | nucleus | 54.26 | 50.49 |
| KRH66418 | Soybean | plastid | 56.38 | 46.09 |
| KRH48855 | Soybean | nucleus, plastid | 56.38 | 46.09 |
| PGSC0003DMT400004241 | Potato | cytosol | 47.87 | 45.45 |
| Solyc01g088660.2.1 | Tomato | cytosol, mitochondrion, nucleus | 45.74 | 43.43 |
| GSMUA_Achr5P12630_001 | Banana | cytosol | 42.55 | 43.01 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 46.81 | 31.65 |
| Bra040173.1-P | Field mustard | nucleus | 48.94 | 30.26 |
| Bra012651.1-P | Field mustard | nucleus | 47.87 | 26.63 |
| TraesCS2D01G455000.1 | Wheat | cytosol, nucleus, plastid | 34.04 | 26.02 |
| TraesCS2B01G476700.1 | Wheat | cytosol, nucleus, plastid | 34.04 | 26.02 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 34.04 | 26.02 |
| TraesCS2A01G454800.1 | Wheat | cytosol, nucleus, plastid | 34.04 | 26.02 |
| EES05711 | Sorghum | cytosol | 35.11 | 25.38 |
| Os04t0586000-00 | Rice | nucleus | 34.04 | 25.2 |
| Zm00001d002523_P001 | Maize | nucleus | 34.04 | 25.0 |
| Bra024966.1-P | Field mustard | nucleus | 46.81 | 24.86 |
| EES12738 | Sorghum | cytosol, nucleus, plastid | 34.04 | 24.81 |
| Bra022099.1-P | Field mustard | nucleus | 45.74 | 23.63 |
| Zm00001d051492_P001 | Maize | cytosol | 29.79 | 22.58 |
| TraesCS6A01G262000.1 | Wheat | nucleus | 29.79 | 22.22 |
| TraesCS6D01G242700.1 | Wheat | nucleus | 29.79 | 22.22 |
| TraesCS6B01G289300.1 | Wheat | nucleus | 28.72 | 21.43 |
| Bra017509.1-P | Field mustard | nucleus | 39.36 | 20.9 |
| GSMUA_Achr2P10380_001 | Banana | cytosol | 52.13 | 19.68 |
| HORVU6Hr1G066610.2 | Barley | cytosol, nucleus | 27.66 | 17.69 |
Protein Annotations
| EnsemblPlants:Bra037639.1 | EnsemblPlants:Bra037639.1-P | EnsemblPlantsGene:Bra037639 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF73 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI000254407E | UniProt:M4F976 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
AT2G44670 (E=2e-032) | senescence-associated protein-related
Coordinates
chrA04:+:18377542..18377922
Molecular Weight (calculated)
10610.4 Da
IEP (calculated)
8.337
GRAVY (calculated)
-0.679
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MASHYNSFFG SEEPHFLESC SLCRKHIGLN SDIFMYRGDK AFCSKECREE QIESDEAKER SWRLSARSLR KKSSEAAKES AAGKTVRTGT LVVA
1: MASYYSGFLG CEEPHFLESC SLCRKHLGLN SDIFMYRGDK AFCSNECREE QIESDEAKER KWKKSSRSLR KNSSETKESA AGNTVRTGTL VVA
Arabidopsis Description
At2g44670/F16B22.16 [Source:UniProtKB/TrEMBL;Acc:O80506]
SUBAcon: [cytosol,nucleus,plastid]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.