Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plasma membrane 1
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G44670.1 | EES01406 | AT3G29160.1 | 21798944 |
| AT2G44670.1 | EES19859 | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002523_P001 | Maize | nucleus | 92.25 | 92.97 |
| Os04t0586000-00 | Rice | nucleus | 80.62 | 81.89 |
| TraesCS2D01G455000.1 | Wheat | cytosol, nucleus, plastid | 73.64 | 77.24 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 72.87 | 76.42 |
| TraesCS2A01G454800.1 | Wheat | cytosol, nucleus, plastid | 72.87 | 76.42 |
| TraesCS2B01G476700.1 | Wheat | cytosol, nucleus, plastid | 72.87 | 76.42 |
| GSMUA_Achr5P12630_001 | Banana | cytosol | 34.11 | 47.31 |
| KRH48855 | Soybean | nucleus, plastid | 36.43 | 40.87 |
| VIT_15s0021g00940.t01 | Wine grape | nucleus | 31.01 | 39.6 |
| KRH66418 | Soybean | plastid | 34.88 | 39.13 |
| EES05711 | Sorghum | cytosol | 37.98 | 37.69 |
| CDX71827 | Canola | cytosol, nucleus, plastid | 25.58 | 37.5 |
| Bra007517.1-P | Field mustard | cytosol | 25.58 | 37.5 |
| CDY41184 | Canola | cytosol | 25.58 | 37.5 |
| CDX74676 | Canola | cytosol | 26.36 | 37.36 |
| CDY48248 | Canola | nucleus | 26.36 | 37.36 |
| Bra004855.1-P | Field mustard | cytosol | 26.36 | 37.36 |
| AT2G44670.1 | Thale cress | cytosol, nucleus, plastid | 26.36 | 36.56 |
| Bra000358.1-P | Field mustard | nucleus | 26.36 | 36.17 |
| CDX83422 | Canola | nucleus | 26.36 | 36.17 |
| EES12745 | Sorghum | cytosol | 27.13 | 35.71 |
| CDX95609 | Canola | cytosol, mitochondrion, nucleus | 25.58 | 35.11 |
| Solyc01g088660.2.1 | Tomato | cytosol, mitochondrion, nucleus | 26.36 | 34.34 |
| PGSC0003DMT400004241 | Potato | cytosol | 26.36 | 34.34 |
| Bra037639.1-P | Field mustard | nucleus | 24.81 | 34.04 |
| CDY23451 | Canola | nucleus | 24.81 | 34.04 |
| CDY30481 | Canola | nucleus | 24.81 | 34.04 |
| KXG30992 | Sorghum | cytosol | 24.81 | 34.04 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 36.43 | 33.81 |
| EES09600 | Sorghum | nucleus | 37.21 | 33.33 |
| EES08321 | Sorghum | nucleus | 36.43 | 32.64 |
| EES12737 | Sorghum | cytosol, mitochondrion, nucleus | 31.01 | 31.5 |
| EES12739 | Sorghum | vacuole | 24.81 | 31.37 |
| EES12744 | Sorghum | cytosol | 24.81 | 31.37 |
| EES05712 | Sorghum | nucleus, plastid | 35.66 | 31.08 |
| EES12740 | Sorghum | cytosol | 24.81 | 29.36 |
| KXG30991 | Sorghum | nucleus | 23.26 | 27.27 |
| KXG27001 | Sorghum | cytosol | 32.56 | 24.56 |
| EES08324 | Sorghum | cytosol | 36.43 | 23.38 |
| KXG19161 | Sorghum | cytosol | 21.71 | 23.14 |
| GSMUA_Achr2P10380_001 | Banana | cytosol | 37.21 | 19.28 |
| EER88959 | Sorghum | nucleus | 21.71 | 18.3 |
Protein Annotations
| EnsemblPlants:EES12738 | EnsemblPlantsGene:SORBI_3006G193900 | EntrezGene:8057710 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | ncoils:Coil |
| PANTHER:PTHR33059 | PANTHER:PTHR33059:SF69 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:EES12738 | ProteinID:EES12738.1 |
| RefSeq:XP_002448410.1 | SEG:seg | unigene:Sbi.7033 | UniParc:UPI0001A87384 | UniProt:C5YEM3 | MapMan:27.3.3 |
Description
hypothetical protein
Coordinates
chr6:-:54712017..54713179
Molecular Weight (calculated)
15088.7 Da
IEP (calculated)
7.504
GRAVY (calculated)
-1.115
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHYHPKEAY GDLEAGFSGH SSSSSSPLKP AASPRRPGRM FCDPCDDADE LHGHHHYLDI CFRCRKLLSG NRDIFMYRGD MPFCSEECRQ EQIEIDEARE
101: QRLKQTGRAE QQRQRQQKQN PQRIPIWAW
101: QRLKQTGRAE QQRQRQQKQN PQRIPIWAW
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.