Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_AchrUn_... |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G44670.1 | GSMUA_Achr10P... | AT3G29160.1 | 21798944 |
| AT2G44670.1 | GSMUA_AchrUn_... | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P12630_001 | Banana | cytosol | 22.09 | 59.14 |
| Bra004855.1-P | Field mustard | cytosol | 20.88 | 57.14 |
| CDX74676 | Canola | cytosol | 20.88 | 57.14 |
| CDY48248 | Canola | nucleus | 20.48 | 56.04 |
| CDX95609 | Canola | cytosol, mitochondrion, nucleus | 20.08 | 53.19 |
| Bra007517.1-P | Field mustard | cytosol | 18.47 | 52.27 |
| CDX71827 | Canola | cytosol, nucleus, plastid | 18.47 | 52.27 |
| CDY41184 | Canola | cytosol | 18.47 | 52.27 |
| Bra000358.1-P | Field mustard | nucleus | 19.68 | 52.13 |
| CDY30481 | Canola | nucleus | 19.68 | 52.13 |
| CDY23451 | Canola | nucleus | 19.68 | 52.13 |
| CDX83422 | Canola | nucleus | 19.68 | 52.13 |
| Bra037639.1-P | Field mustard | nucleus | 19.68 | 52.13 |
| VIT_15s0021g00940.t01 | Wine grape | nucleus | 20.88 | 51.49 |
| AT2G44670.1 | Thale cress | cytosol, nucleus, plastid | 18.88 | 50.54 |
| KRH48855 | Soybean | nucleus, plastid | 22.89 | 49.57 |
| KRH66418 | Soybean | plastid | 22.49 | 48.7 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 27.31 | 47.22 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 25.7 | 46.04 |
| Solyc01g088660.2.1 | Tomato | cytosol, mitochondrion, nucleus | 18.07 | 45.45 |
| PGSC0003DMT400004241 | Potato | cytosol | 18.07 | 45.45 |
| GSMUA_Achr11P... | Banana | cytosol | 23.69 | 41.26 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 16.06 | 41.24 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 15.66 | 39.8 |
| Os04t0586000-00 | Rice | nucleus | 20.08 | 39.37 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 18.88 | 38.21 |
| TraesCS2A01G454800.1 | Wheat | cytosol, nucleus, plastid | 18.88 | 38.21 |
| TraesCS2B01G476700.1 | Wheat | cytosol, nucleus, plastid | 18.88 | 38.21 |
| TraesCS2D01G455000.1 | Wheat | cytosol, nucleus, plastid | 18.88 | 38.21 |
| EES12738 | Sorghum | cytosol, nucleus, plastid | 19.28 | 37.21 |
| Zm00001d002523_P001 | Maize | nucleus | 18.88 | 36.72 |
| TraesCS6A01G262000.1 | Wheat | nucleus | 15.26 | 30.16 |
| TraesCS6B01G289300.1 | Wheat | nucleus | 15.26 | 30.16 |
| TraesCS6D01G242700.1 | Wheat | nucleus | 15.26 | 30.16 |
| EES05711 | Sorghum | cytosol | 14.46 | 27.69 |
| Zm00001d051492_P001 | Maize | cytosol | 13.25 | 26.61 |
| HORVU6Hr1G066610.2 | Barley | cytosol, nucleus | 14.86 | 25.17 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 18.47 | 19.83 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P10380_001 | EnsemblPlants:GSMUA_Achr2T10380_001 | EnsemblPlantsGene:GSMUA_Achr2G10380_001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF73 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI0002958C7F | UniProt:M0S6S9 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
Putative DUF581 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G10380_001]
Coordinates
chr2:+:13514264..13515090
Molecular Weight (calculated)
27337.3 Da
IEP (calculated)
6.928
GRAVY (calculated)
-0.334
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHVLSYQPH RINSERADQA SFSNGLVAWI PRPVAVWKPP VPLSLSLHKT THPINVVPST TSLYTNLLLL PSETDPLSSL PICHYILAEF ELMGSSSFSS
101: SSSSSDGSLS TVEIQAGFSG CSSYVPSPPP SCYGSAMLGS LSSLRPRSLF FDGLDDEEDD EPRHFLDSCS LCRKPLARNR DIFMYRGDMP FCSEDCRKEQ
201: IEIDEAKEKS WKLSIKTSSS RKEQQRKIAA AGGAKSEKIH VRAGTVVAG
101: SSSSSDGSLS TVEIQAGFSG CSSYVPSPPP SCYGSAMLGS LSSLRPRSLF FDGLDDEEDD EPRHFLDSCS LCRKPLARNR DIFMYRGDMP FCSEDCRKEQ
201: IEIDEAKEKS WKLSIKTSSS RKEQQRKIAA AGGAKSEKIH VRAGTVVAG
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.