Subcellular Localization
min:
: max
Winner_takes_all: nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 4
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_AchrUn_... |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G44670.1 | GSMUA_Achr10P... | AT3G29160.1 | 21798944 |
| AT2G44670.1 | GSMUA_AchrUn_... | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P12630_001 | Banana | cytosol | 37.41 | 55.91 |
| CDX95609 | Canola | cytosol, mitochondrion, nucleus | 34.53 | 51.06 |
| Bra000358.1-P | Field mustard | nucleus | 33.81 | 50.0 |
| CDX83422 | Canola | nucleus | 33.81 | 50.0 |
| CDX74676 | Canola | cytosol | 32.37 | 49.45 |
| Bra004855.1-P | Field mustard | cytosol | 32.37 | 49.45 |
| CDY48248 | Canola | nucleus | 32.37 | 49.45 |
| AT2G44670.1 | Thale cress | cytosol, nucleus, plastid | 32.37 | 48.39 |
| CDY23451 | Canola | nucleus | 31.65 | 46.81 |
| CDY30481 | Canola | nucleus | 31.65 | 46.81 |
| Bra037639.1-P | Field mustard | nucleus | 31.65 | 46.81 |
| CDX71827 | Canola | cytosol, nucleus, plastid | 29.5 | 46.59 |
| Bra007517.1-P | Field mustard | cytosol | 29.5 | 46.59 |
| CDY41184 | Canola | cytosol | 29.5 | 46.59 |
| KRH66418 | Soybean | plastid | 38.13 | 46.09 |
| KRH48855 | Soybean | nucleus, plastid | 38.13 | 46.09 |
| Solyc01g088660.2.1 | Tomato | cytosol, mitochondrion, nucleus | 30.94 | 43.43 |
| PGSC0003DMT400004241 | Potato | cytosol | 30.94 | 43.43 |
| VIT_15s0021g00940.t01 | Wine grape | nucleus | 30.94 | 42.57 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 29.5 | 41.84 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 28.78 | 41.24 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 35.97 | 40.65 |
| TraesCS2A01G454800.1 | Wheat | cytosol, nucleus, plastid | 35.25 | 39.84 |
| TraesCS2D01G455000.1 | Wheat | cytosol, nucleus, plastid | 35.25 | 39.84 |
| TraesCS2B01G476700.1 | Wheat | cytosol, nucleus, plastid | 34.53 | 39.02 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 40.29 | 38.89 |
| Os04t0586000-00 | Rice | nucleus | 35.25 | 38.58 |
| Zm00001d002523_P001 | Maize | nucleus | 34.53 | 37.5 |
| EES12738 | Sorghum | cytosol, nucleus, plastid | 33.81 | 36.43 |
| GSMUA_Achr11P... | Banana | cytosol | 36.69 | 35.66 |
| TraesCS6B01G289300.1 | Wheat | nucleus | 28.78 | 31.75 |
| TraesCS6A01G262000.1 | Wheat | nucleus | 28.06 | 30.95 |
| TraesCS6D01G242700.1 | Wheat | nucleus | 28.06 | 30.95 |
| EES05711 | Sorghum | cytosol | 27.34 | 29.23 |
| Zm00001d051492_P001 | Maize | cytosol | 25.18 | 28.23 |
| HORVU6Hr1G066610.2 | Barley | cytosol, nucleus | 27.34 | 25.85 |
| GSMUA_Achr2P10380_001 | Banana | cytosol | 46.04 | 25.7 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 31.65 | 18.97 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP04800_001 | EnsemblPlants:GSMUA_AchrUn_randomT04800_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG04800_001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF73 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI000294A599 | UniProt:M0U6E2 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04800_001]
Coordinates
chrchrUn_random:+:18925136..18925648
Molecular Weight (calculated)
15652.1 Da
IEP (calculated)
8.495
GRAVY (calculated)
-0.929
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRPQRSRGR SLEITMDSSR SSSFSSPSHG SLNDAGPEAG NSSAALGRLY YDAFDDEPRH FLDCCSLCRK PLASNRNIFM YRGDTPFCSE ECRQEQIEID
101: EAGENSRKLS VKVSRSRKER RKSGESQKIH VWADTAVAR
101: EAGENSRKLS VKVSRSRKER RKSGESQKIH VWADTAVAR
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.