Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 58.33 | 58.74 |
| GSMUA_Achr5P12630_001 | Banana | cytosol | 34.72 | 53.76 |
| GSMUA_Achr7P05660_001 | Banana | cytosol | 30.56 | 45.36 |
| GSMUA_Achr4P19900_001 | Banana | cytosol | 29.86 | 43.88 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 38.89 | 40.29 |
| PGSC0003DMT400068383 | Potato | plastid | 34.72 | 37.59 |
| CDY38416 | Canola | nucleus | 32.64 | 37.3 |
| PGSC0003DMT400068381 | Potato | nucleus | 37.5 | 36.73 |
| CDY40586 | Canola | nucleus | 40.28 | 36.71 |
| Bra024966.1-P | Field mustard | nucleus | 44.44 | 36.16 |
| AT4G17670.1 | Thale cress | nucleus | 39.58 | 35.85 |
| VIT_02s0012g00280.t01 | Wine grape | nucleus | 38.89 | 35.67 |
| AT5G47060.2 | Thale cress | nucleus | 43.75 | 35.59 |
| Solyc06g061010.2.1 | Tomato | plastid | 33.33 | 35.29 |
| Bra040173.1-P | Field mustard | nucleus | 36.11 | 34.21 |
| CDX78788 | Canola | nucleus | 36.11 | 34.21 |
| CDY72627 | Canola | cytosol, nucleus | 40.28 | 34.12 |
| Bra022099.1-P | Field mustard | nucleus | 43.06 | 34.07 |
| CDY12406 | Canola | nucleus | 43.06 | 34.07 |
| KRH77270 | Soybean | nucleus | 36.81 | 33.97 |
| CDY33512 | Canola | nucleus | 43.06 | 33.88 |
| KRH57558 | Soybean | plastid | 39.58 | 33.33 |
| Bra017509.1-P | Field mustard | nucleus | 40.97 | 33.33 |
| CDX77736 | Canola | nucleus | 42.36 | 33.15 |
| CDY43446 | Canola | nucleus | 40.28 | 33.14 |
| CDY09610 | Canola | nucleus | 38.19 | 32.74 |
| CDX90460 | Canola | nucleus | 38.19 | 32.54 |
| Bra012651.1-P | Field mustard | nucleus | 38.19 | 32.54 |
| KRH28217 | Soybean | nucleus | 35.42 | 32.08 |
| KRH04277 | Soybean | nucleus, plastid | 38.89 | 31.46 |
| GSMUA_Achr2P10380_001 | Banana | cytosol | 47.22 | 27.31 |
| PGSC0003DMT400004695 | Potato | nucleus | 34.03 | 26.92 |
| Solyc08g077480.2.1 | Tomato | nucleus | 33.33 | 25.4 |
| GSMUA_Achr3P12600_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 32.64 | 20.26 |
Protein Annotations
| MapMan:27.3.3 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr8G14880_001 | EnsemblPlants:GSMUA_Achr8P14880_001 |
| EnsemblPlants:GSMUA_Achr8T14880_001 | InterPro:IPR007650 | UniProt:M0TQJ1 | PFAM:PF04570 | PFscan:PS51795 | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF73 | UniParc:UPI0002966911 | InterPro:Zf-FLZ_dom | SEG:seg | : | : |
Description
Putative DUF581 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G14880_001]
Coordinates
chr8:+:12314997..12315783
Molecular Weight (calculated)
15174.4 Da
IEP (calculated)
7.003
GRAVY (calculated)
-0.665
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSSFSCSS SSSASSSSAS DLEAGRAAPY NSAGAAAGSR SPKARFFCDG LDHEEPHHFL DSCFLCGKPL AGNRDIFMYR GDMPFCSEEC RQEQIEMDES
101: KEQNRKVPPK ASSSSKDSSK GGTATGPSKS HKVHVRAGTA VVAG
101: KEQNRKVPPK ASSSSKDSSK GGTATGPSKS HKVHVRAGTA VVAG
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.