Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40586 | Canola | nucleus | 86.81 | 100.0 |
| CDY72627 | Canola | cytosol, nucleus | 83.52 | 89.41 |
| CDX77736 | Canola | nucleus | 81.32 | 80.43 |
| CDY33512 | Canola | nucleus | 80.77 | 80.33 |
| AT5G47060.2 | Thale cress | nucleus | 75.82 | 77.97 |
| CDY43446 | Canola | nucleus | 73.63 | 76.57 |
| CDY38416 | Canola | nucleus | 48.35 | 69.84 |
| CDY09610 | Canola | nucleus | 63.74 | 69.05 |
| CDX90460 | Canola | nucleus | 63.74 | 68.64 |
| CDX78788 | Canola | nucleus | 54.95 | 65.79 |
| VIT_02s0012g00280.t01 | Wine grape | nucleus | 50.0 | 57.96 |
| KRH77270 | Soybean | nucleus | 48.35 | 56.41 |
| Solyc06g061010.2.1 | Tomato | plastid | 41.21 | 55.15 |
| KRH28217 | Soybean | nucleus | 47.25 | 54.09 |
| KRH57558 | Soybean | plastid | 48.35 | 51.46 |
| KRH04277 | Soybean | nucleus, plastid | 48.9 | 50.0 |
| PGSC0003DMT400068381 | Potato | nucleus | 39.01 | 48.3 |
| CDX95609 | Canola | cytosol, mitochondrion, nucleus | 24.18 | 46.81 |
| CDX83422 | Canola | nucleus | 24.18 | 46.81 |
| CDY30481 | Canola | nucleus | 23.63 | 45.74 |
| CDY23451 | Canola | nucleus | 23.63 | 45.74 |
| CDX74676 | Canola | cytosol | 22.53 | 45.05 |
| CDY48248 | Canola | nucleus | 22.53 | 45.05 |
| Solyc08g077480.2.1 | Tomato | nucleus | 46.7 | 44.97 |
| CDY41184 | Canola | cytosol | 21.43 | 44.32 |
| CDX71827 | Canola | cytosol, nucleus, plastid | 21.43 | 44.32 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 34.07 | 43.06 |
| GSMUA_Achr11P... | Banana | cytosol | 33.52 | 42.66 |
Protein Annotations
| EnsemblPlants:CDY12406 | EnsemblPlantsGene:GSBRNA2T00061643001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF73 |
| PFAM:PF04570 | PFscan:PS51795 | ProteinID:CDY12406 | ProteinID:CDY12406.1 | SEG:seg | UniParc:UPI0004EEFFC0 |
| UniProt:A0A078FGS4 | MapMan:27.3.3 | : | : | : | : |
Description
BnaC08g08950DBnaC08g08950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGS4]
Coordinates
chrLK032022:+:4154..5009
Molecular Weight (calculated)
21061.0 Da
IEP (calculated)
7.892
GRAVY (calculated)
-1.109
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSERKPYF IEEEDELASS LSEMEAGFSG NRVNSQNGSV PSPFSYVRMN SFSKNTNSYY NNYNHPSYYH HQYSVSSPRS AVSGRFHDFR FDNRQPHFLD
101: SCFLCKKPLG DNRDIYMYRG DTPFCSEECR QEQIERDEAK EKKQNLSYSV NSAMRRKEQR SSSSSPTRSR GYSCHNGTIA AA
101: SCFLCKKPLG DNRDIYMYRG DTPFCSEECR QEQIERDEAK EKKQNLSYSV NSAMRRKEQR SSSSSPTRSR GYSCHNGTIA AA
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.