Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017509.1-P | Field mustard | nucleus | 99.43 | 98.31 |
| CDY40586 | Canola | nucleus | 70.86 | 78.48 |
| CDY33512 | Canola | nucleus | 78.29 | 74.86 |
| CDX77736 | Canola | nucleus | 78.29 | 74.46 |
| CDY12406 | Canola | nucleus | 76.57 | 73.63 |
| CDY72627 | Canola | cytosol, nucleus | 70.29 | 72.35 |
| AT5G47060.2 | Thale cress | nucleus | 72.57 | 71.75 |
| CDY09610 | Canola | nucleus | 63.43 | 66.07 |
| CDX90460 | Canola | nucleus | 63.43 | 65.68 |
| CDY38416 | Canola | nucleus | 46.86 | 65.08 |
| CDX78788 | Canola | nucleus | 53.71 | 61.84 |
| VIT_02s0012g00280.t01 | Wine grape | nucleus | 49.14 | 54.78 |
| KRH77270 | Soybean | nucleus | 48.0 | 53.85 |
| Solyc06g061010.2.1 | Tomato | plastid | 38.86 | 50.0 |
| KRH28217 | Soybean | nucleus | 45.14 | 49.69 |
| PGSC0003DMT400068381 | Potato | nucleus | 40.57 | 48.3 |
| KRH57558 | Soybean | plastid | 46.29 | 47.37 |
| KRH04277 | Soybean | nucleus, plastid | 47.43 | 46.63 |
| Solyc08g077480.2.1 | Tomato | nucleus | 44.0 | 40.74 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 33.14 | 40.28 |
| CDX83422 | Canola | nucleus | 21.14 | 39.36 |
| CDX95609 | Canola | cytosol, mitochondrion, nucleus | 21.14 | 39.36 |
| GSMUA_Achr11P... | Banana | cytosol | 32.0 | 39.16 |
| CDX71827 | Canola | cytosol, nucleus, plastid | 19.43 | 38.64 |
| CDY41184 | Canola | cytosol | 19.43 | 38.64 |
| CDY48248 | Canola | nucleus | 20.0 | 38.46 |
| CDX74676 | Canola | cytosol | 20.0 | 38.46 |
| CDY30481 | Canola | nucleus | 20.57 | 38.3 |
| CDY23451 | Canola | nucleus | 20.57 | 38.3 |
Protein Annotations
| EnsemblPlants:CDY43446 | EnsemblPlantsGene:GSBRNA2T00076672001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF73 |
| PFAM:PF04570 | PFscan:PS51795 | ProteinID:CDY43446 | ProteinID:CDY43446.1 | SEG:seg | UniParc:UPI0004EF1A66 |
| UniProt:A0A078I0U5 | MapMan:27.3.3 | : | : | : | : |
Description
BnaAnng07180DBnaAnng07180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0U5]
Coordinates
chrLK032557:-:99607..100675
Molecular Weight (calculated)
20062.1 Da
IEP (calculated)
7.497
GRAVY (calculated)
-0.939
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVSARKPCF IEEDDDLASS LSEMEAGFSG GNTQSGVVSR PLSYSSLRNT NFCHNTYTHG YYYHQYSVSS PRSVVSRRFH DFRLDNQQPH YLDSCFLCKK
101: PLHNRDIYMY RGDTPYCSEE CRQEQIERDE EEEKKKNLSY SVKSAMRRKE QRSSSSPTRS GGYAAIIHNG PVAAA
101: PLHNRDIYMY RGDTPYCSEE CRQEQIERDE EEEKKKNLSY SVKSAMRRKE QRSSSSPTRS GGYAAIIHNG PVAAA
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.