Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400068383 | Potato | plastid | 89.71 | 91.73 |
| CDY38416 | Canola | nucleus | 44.12 | 47.62 |
| AT4G17670.1 | Thale cress | nucleus | 54.41 | 46.54 |
| CDY40586 | Canola | nucleus | 53.68 | 46.2 |
| KRH77270 | Soybean | nucleus | 52.94 | 46.15 |
| VIT_02s0012g00280.t01 | Wine grape | nucleus | 52.94 | 45.86 |
| KRH57558 | Soybean | plastid | 55.88 | 44.44 |
| KRH28217 | Soybean | nucleus | 51.47 | 44.03 |
| AT5G47060.2 | Thale cress | nucleus | 56.62 | 43.5 |
| Solyc01g088660.2.1 | Tomato | cytosol, mitochondrion, nucleus | 31.62 | 43.43 |
| Bra012651.1-P | Field mustard | nucleus | 53.68 | 43.2 |
| Bra024966.1-P | Field mustard | nucleus | 55.88 | 42.94 |
| CDX90460 | Canola | nucleus | 52.94 | 42.6 |
| CDY72627 | Canola | cytosol, nucleus | 52.94 | 42.35 |
| CDY09610 | Canola | nucleus | 52.21 | 42.26 |
| Bra040173.1-P | Field mustard | nucleus | 47.06 | 42.11 |
| CDX78788 | Canola | nucleus | 47.06 | 42.11 |
| KRH04277 | Soybean | nucleus, plastid | 54.41 | 41.57 |
| CDY12406 | Canola | nucleus | 55.15 | 41.21 |
| CDX77736 | Canola | nucleus | 55.15 | 40.76 |
| Bra022099.1-P | Field mustard | nucleus | 54.41 | 40.66 |
| CDY33512 | Canola | nucleus | 53.68 | 39.89 |
| Bra017509.1-P | Field mustard | nucleus | 50.74 | 38.98 |
| CDY43446 | Canola | nucleus | 50.0 | 38.86 |
| Solyc08g077480.2.1 | Tomato | nucleus | 50.0 | 35.98 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 35.29 | 33.33 |
| GSMUA_Achr11P... | Banana | cytosol | 33.82 | 32.17 |
Protein Annotations
| EnsemblPlants:Solyc06g061010.2.1 | EnsemblPlantsGene:Solyc06g061010.2 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF73 |
| PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI0002766570 | UniProt:K4C6T1 | MapMan:27.3.3 |
Description
No Description!
Coordinates
chr6:-:38997037..38998228
Molecular Weight (calculated)
15273.7 Da
IEP (calculated)
8.747
GRAVY (calculated)
-0.850
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSATRRGPF CYTSLQRKSS LTSLSSMSSS SSSSSSMSSP RFAGGRNYSD TTRFQQQPHF LDACFLCNKP LGFNRDIFMY RGDTPFCSEE CRQEEIDNDE
101: AKEKKLNLSA SKALREKDHT TSPKNYHFPR GTIAAA
101: AKEKKLNLSA SKALREKDHT TSPKNYHFPR GTIAAA
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.