Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33512 | Canola | nucleus | 97.18 | 93.99 |
| CDX77736 | Canola | nucleus | 95.48 | 91.85 |
| AT5G47060.2 | Thale cress | nucleus | 80.79 | 80.79 |
| Bra017509.1-P | Field mustard | nucleus | 78.53 | 78.53 |
| Bra022099.1-P | Field mustard | nucleus | 80.23 | 78.02 |
| Bra012651.1-P | Field mustard | nucleus | 67.8 | 71.01 |
| Bra040173.1-P | Field mustard | nucleus | 58.19 | 67.76 |
| VIT_02s0012g00280.t01 | Wine grape | nucleus | 53.67 | 60.51 |
| KRH77270 | Soybean | nucleus | 51.98 | 58.97 |
| KRH28217 | Soybean | nucleus | 50.28 | 55.97 |
| Solyc06g061010.2.1 | Tomato | plastid | 42.94 | 55.88 |
| KRH57558 | Soybean | plastid | 53.11 | 54.97 |
| PGSC0003DMT400068381 | Potato | nucleus | 43.5 | 52.38 |
| KRH04277 | Soybean | nucleus, plastid | 52.54 | 52.25 |
| Bra000358.1-P | Field mustard | nucleus | 25.42 | 47.87 |
| Solyc08g077480.2.1 | Tomato | nucleus | 50.28 | 47.09 |
| Bra037639.1-P | Field mustard | nucleus | 24.86 | 46.81 |
| Bra004855.1-P | Field mustard | cytosol | 23.73 | 46.15 |
| Bra007517.1-P | Field mustard | cytosol | 22.6 | 45.45 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 36.16 | 44.44 |
| GSMUA_Achr11P... | Banana | cytosol | 35.03 | 43.36 |
Protein Annotations
| EnsemblPlants:Bra024966.1 | EnsemblPlants:Bra024966.1-P | EnsemblPlantsGene:Bra024966 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF73 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI000253FAF7 | UniProt:M4E860 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
AT5G47060 (E=1e-058) | senescence-associated protein-related
Coordinates
chrA06:-:24437687..24438355
Molecular Weight (calculated)
20476.7 Da
IEP (calculated)
9.311
GRAVY (calculated)
-0.992
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSARKPYF IDLGSSLSEM EAGFSGNSGN PRHGVVSRPF SYTRMNSISR HTNYCYNNYP QSCYYNQYSV SSPRSVVSGR FHDFRFDHQQ PHFLDSCFLC
101: KKPLGDNRDI YMYRGDTPFC SEECRQEQIE RDEAKEKKKN LSYSVKSAMR RKEQRSSSSS PTRSRDYAFR NGTVAAA
101: KKPLGDNRDI YMYRGDTPFC SEECRQEQIE RDEAKEKKKN LSYSVKSAMR RKEQRSSSSS PTRSRDYAFR NGTVAAA
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.