Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90460 | Canola | nucleus | 96.45 | 96.45 |
| CDY09610 | Canola | nucleus | 94.67 | 95.24 |
| AT4G17670.1 | Thale cress | nucleus | 79.29 | 84.28 |
| Bra040173.1-P | Field mustard | nucleus | 73.96 | 82.24 |
| Bra024966.1-P | Field mustard | nucleus | 71.01 | 67.8 |
| Bra017509.1-P | Field mustard | nucleus | 66.27 | 63.28 |
| Bra022099.1-P | Field mustard | nucleus | 67.46 | 62.64 |
| Solyc06g061010.2.1 | Tomato | plastid | 43.2 | 53.68 |
| VIT_02s0012g00280.t01 | Wine grape | nucleus | 48.52 | 52.23 |
| KRH77270 | Soybean | nucleus | 47.93 | 51.92 |
| PGSC0003DMT400068381 | Potato | nucleus | 44.38 | 51.02 |
| KRH28217 | Soybean | nucleus | 47.93 | 50.94 |
| KRH57558 | Soybean | plastid | 50.89 | 50.29 |
| Bra004855.1-P | Field mustard | cytosol | 26.04 | 48.35 |
| KRH04277 | Soybean | nucleus, plastid | 50.89 | 48.31 |
| Bra037639.1-P | Field mustard | nucleus | 26.63 | 47.87 |
| Bra000358.1-P | Field mustard | nucleus | 26.63 | 47.87 |
| Bra007517.1-P | Field mustard | cytosol | 23.67 | 45.45 |
| Solyc08g077480.2.1 | Tomato | nucleus | 48.52 | 43.39 |
| GSMUA_Achr11P... | Banana | cytosol | 34.32 | 40.56 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 32.54 | 38.19 |
Protein Annotations
| EnsemblPlants:Bra012651.1 | EnsemblPlants:Bra012651.1-P | EnsemblPlantsGene:Bra012651 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | ncoils:Coil |
| PANTHER:PTHR33059 | PANTHER:PTHR33059:SF73 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI00025409A7 |
| UniProt:M4D841 | MapMan:27.3.3 | : | : | : | : |
Description
AT4G17670 (E=4e-054) | senescence-associated protein-related
Coordinates
chrA03:-:22909290..22909927
Molecular Weight (calculated)
19514.6 Da
IEP (calculated)
8.115
GRAVY (calculated)
-0.869
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSTRKPYF IEEEDDGLVS LAEMEAGVSS PSSPCYTNLN QYHPQSYYYN YHQYSVSSPR SVVVSGKFHD FRFDNSCFGQ QSVPHFLDSC FLCRKRLGHN
101: KDIFMYRGDT PFCSEECREE QIKRDESKEK KKNLSSSVKA MRRNEMRSSS TSPTRSRDYA FRTGTVAAA
101: KDIFMYRGDT PFCSEECREE QIKRDESKEK KKNLSSSVKA MRRNEMRSSS TSPTRSRDYA FRTGTVAAA
001: MEVSMRKPYF IEEEDDGFVS LSEMEAGVSS PSCYNYPQSY YYNHHHHQYS VSSPRSGKFH DFRFDNSYYG YGQPHFLDSC FLCKKRLGDN RDIFMYRGDT
101: PFCSEECREE QIERDEAKEK KQSLSTSVKA MRRNEKRSSS SSPTRSRNYA FRTGTVAAA
101: PFCSEECREE QIERDEAKEK KQSLSTSVKA MRRNEKRSSS SSPTRSRNYA FRTGTVAAA
Arabidopsis Description
Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VZM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.