Factsheet for GSMUA_Achr11P23130_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P14880_001	Banana	nucleus	58.74	58.33
GSMUA_Achr5P12630_001	Banana	cytosol	34.27	52.69
GSMUA_Achr7P05660_001	Banana	cytosol	30.07	44.33
GSMUA_Achr4P19900_001	Banana	cytosol	30.07	43.88
CDY38416	Canola	nucleus	34.27	38.89
AT4G17670.1	Thale cress	nucleus	41.96	37.74
VIT_02s0012g00280.t01	Wine grape	nucleus	41.26	37.58
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	35.66	36.69
PGSC0003DMT400068383	Potato	plastid	33.57	36.09
CDY40586	Canola	nucleus	39.86	36.08
AT5G47060.2	Thale cress	nucleus	43.36	35.03
Bra024966.1-P	Field mustard	nucleus	43.36	35.03
Bra040173.1-P	Field mustard	nucleus	37.06	34.87
CDX78788	Canola	nucleus	37.06	34.87
Bra012651.1-P	Field mustard	nucleus	40.56	34.32
KRH77270	Soybean	nucleus	37.06	33.97
CDY09610	Canola	nucleus	39.86	33.93
Solyc06g061010.2.1	Tomato	plastid	32.17	33.82
CDX90460	Canola	nucleus	39.86	33.73
CDY72627	Canola	cytosol, nucleus	39.86	33.53
CDY12406	Canola	nucleus	42.66	33.52
Bra022099.1-P	Field mustard	nucleus	42.66	33.52
CDY33512	Canola	nucleus	41.96	32.79
PGSC0003DMT400068381	Potato	nucleus	33.57	32.65
CDX77736	Canola	nucleus	41.96	32.61
Bra017509.1-P	Field mustard	nucleus	39.86	32.2
KRH28217	Soybean	nucleus	35.66	32.08
CDY43446	Canola	nucleus	39.16	32.0
KRH57558	Soybean	plastid	37.76	31.58
KRH04277	Soybean	nucleus, plastid	37.06	29.78
PGSC0003DMT400004695	Potato	nucleus	32.87	25.82
Solyc08g077480.2.1	Tomato	nucleus	32.17	24.34
GSMUA_Achr2P10380_001	Banana	cytosol	41.26	23.69
GSMUA_Achr3P12600_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	33.57	20.69

Protein Annotations

EnsemblPlants:GSMUA_Achr11P23130_001	EnsemblPlants:GSMUA_Achr11T23130_001	EnsemblPlantsGene:GSMUA_Achr11G23130_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987
InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF73	PFAM:PF04570	PFscan:PS51795
UniParc:UPI0002963FEF	UniProt:M0RUP3	MapMan:27.3.3	:	:	:

Description

Putative DUF581 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G23130_001]

Coordinates

chr11:-:23149129..23150134

Molecular Weight (calculated)

15390.8 Da

IEP (calculated)

6.775

GRAVY (calculated)

-0.561

Length

143 amino acids

Sequence
(BLAST)

001: MEPFSILYSS SSDLEAGWGP PYAHPTPPSP NGSAGGVARP RTPTYRFFCV DVDGPPHHFL DSCFLCRKPL AGNRDIFMYR GDTPFCSEEC RLVQIEMDEG
101: TEQSRKHSLK ASSSTDSNKA GAATSPSKSH EAHARTGTVV AAG

Best Arabidopsis Sequence Match ( AT4G17670.1 )
(BLAST)

001: MEVSMRKPYF IEEEDDGFVS LSEMEAGVSS PSCYNYPQSY YYNHHHHQYS VSSPRSGKFH DFRFDNSYYG YGQPHFLDSC FLCKKRLGDN RDIFMYRGDT
101: PFCSEECREE QIERDEAKEK KQSLSTSVKA MRRNEKRSSS SSPTRSRNYA FRTGTVAAA

Arabidopsis Description

Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VZM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.