Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28217 | Soybean | nucleus | 91.03 | 89.31 |
| VIT_02s0012g00280.t01 | Wine grape | nucleus | 61.54 | 61.15 |
| KRH48855 | Soybean | nucleus, plastid | 44.23 | 60.0 |
| KRH66418 | Soybean | plastid | 42.95 | 58.26 |
| KRH57558 | Soybean | plastid | 63.46 | 57.89 |
| PGSC0003DMT400068383 | Potato | plastid | 48.08 | 56.39 |
| CDY38416 | Canola | nucleus | 45.51 | 56.35 |
| KRH04277 | Soybean | nucleus, plastid | 64.1 | 56.18 |
| Solyc06g061010.2.1 | Tomato | plastid | 46.15 | 52.94 |
| CDY40586 | Canola | nucleus | 53.21 | 52.53 |
| AT4G17670.1 | Thale cress | nucleus | 53.21 | 52.2 |
| Bra024966.1-P | Field mustard | nucleus | 58.97 | 51.98 |
| AT5G47060.2 | Thale cress | nucleus | 58.33 | 51.41 |
| CDX77736 | Canola | nucleus | 60.26 | 51.09 |
| CDY33512 | Canola | nucleus | 58.97 | 50.27 |
| CDX78788 | Canola | nucleus | 47.44 | 48.68 |
| Bra040173.1-P | Field mustard | nucleus | 47.44 | 48.68 |
| CDX90460 | Canola | nucleus | 52.56 | 48.52 |
| CDY12406 | Canola | nucleus | 56.41 | 48.35 |
| CDY09610 | Canola | nucleus | 51.92 | 48.21 |
| Solyc08g077480.2.1 | Tomato | nucleus | 58.33 | 48.15 |
| Bra017509.1-P | Field mustard | nucleus | 54.49 | 48.02 |
| CDY43446 | Canola | nucleus | 53.85 | 48.0 |
| Bra012651.1-P | Field mustard | nucleus | 51.92 | 47.93 |
| PGSC0003DMT400004695 | Potato | nucleus | 55.77 | 47.8 |
| CDY72627 | Canola | cytosol, nucleus | 51.28 | 47.06 |
| Bra022099.1-P | Field mustard | nucleus | 54.49 | 46.7 |
| GSMUA_Achr11P... | Banana | cytosol | 33.97 | 37.06 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 33.97 | 36.81 |
Protein Annotations
| EMBL:ACUP02000668 | EnsemblPlants:KRH77270 | EnsemblPlantsGene:GLYMA_01G203200 | EntrezGene:100797178 | Gene3D:2.10.110.10 | InterPro:IPR007650 |
| InterPro:Zf-FLZ_dom | ncoils:Coil | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF73 | PFAM:PF04570 | PFscan:PS51795 |
| ProteinID:KRH77270 | ProteinID:KRH77270.1 | UniParc:UPI00023372F3 | UniProt:I1J9P0 | MapMan:27.3.3 | : |
Description
hypothetical protein
Coordinates
chr1:-:53607286..53609267
Molecular Weight (calculated)
18090.0 Da
IEP (calculated)
8.961
GRAVY (calculated)
-1.067
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGSIKRHC FSEEDDVEPG YSGHNHFHHY QHGFISRTLG YGTFYNRRVR SHSIFSPRSG RFYDARFEDH QPHFLQACSL CKKPLGDNRD IFMYRGDTPF
101: CSEECRQEQI ERDEAKEKNK NLSSSMKALR KKEQRNSVSP NKTQDYSFRA GTVAAA
101: CSEECRQEQI ERDEAKEKNK NLSSSMKALR KKEQRNSVSP NKTQDYSFRA GTVAAA
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.