Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72627 | Canola | cytosol, nucleus | 96.2 | 89.41 |
| CDY12406 | Canola | nucleus | 100.0 | 86.81 |
| CDX77736 | Canola | nucleus | 84.81 | 72.83 |
| CDY33512 | Canola | nucleus | 83.54 | 72.13 |
| CDY43446 | Canola | nucleus | 78.48 | 70.86 |
| CDY38416 | Canola | nucleus | 55.7 | 69.84 |
| AT5G47060.2 | Thale cress | nucleus | 77.22 | 68.93 |
| CDY09610 | Canola | nucleus | 70.89 | 66.67 |
| CDX90460 | Canola | nucleus | 70.89 | 66.27 |
| CDX78788 | Canola | nucleus | 61.39 | 63.82 |
| VIT_02s0012g00280.t01 | Wine grape | nucleus | 54.43 | 54.78 |
| Solyc06g061010.2.1 | Tomato | plastid | 46.2 | 53.68 |
| KRH77270 | Soybean | nucleus | 52.53 | 53.21 |
| KRH28217 | Soybean | nucleus | 51.27 | 50.94 |
| KRH57558 | Soybean | plastid | 51.9 | 47.95 |
| CDX95609 | Canola | cytosol, mitochondrion, nucleus | 27.85 | 46.81 |
| CDX83422 | Canola | nucleus | 27.85 | 46.81 |
| KRH04277 | Soybean | nucleus, plastid | 52.53 | 46.63 |
| PGSC0003DMT400068381 | Potato | nucleus | 43.04 | 46.26 |
| CDY30481 | Canola | nucleus | 27.22 | 45.74 |
| CDY23451 | Canola | nucleus | 27.22 | 45.74 |
| CDX74676 | Canola | cytosol | 25.95 | 45.05 |
| CDY48248 | Canola | nucleus | 25.95 | 45.05 |
| CDY41184 | Canola | cytosol | 24.68 | 44.32 |
| CDX71827 | Canola | cytosol, nucleus, plastid | 24.68 | 44.32 |
| GSMUA_Achr8P14880_001 | Banana | nucleus | 36.71 | 40.28 |
| GSMUA_Achr11P... | Banana | cytosol | 36.08 | 39.86 |
| Solyc08g077480.2.1 | Tomato | nucleus | 47.47 | 39.68 |
Protein Annotations
| EnsemblPlants:CDY40586 | EnsemblPlantsGene:GSBRNA2T00069919001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF73 |
| PFAM:PF04570 | PFscan:PS51795 | ProteinID:CDY40586 | ProteinID:CDY40586.1 | SEG:seg | UniParc:UPI0004EDD129 |
| UniProt:A0A078HSB4 | MapMan:27.3.3 | : | : | : | : |
Description
BnaC02g33060DBnaC02g33060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSB4]
Coordinates
chrLK032474:-:289421..290220
Molecular Weight (calculated)
18447.0 Da
IEP (calculated)
7.096
GRAVY (calculated)
-1.173
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSERKPYF IEEEDELASS LSEMEAGFSK NTNSYYNNYN HPSYYHHQYS VSSPRSAVSG RFHDFRFDNR QPHFLDSCFL CKKPLGDNRD IYMYRGDTPF
101: CSEECRQEQI ERDEAKEKKQ NLSYSVNSAM RRKEQRSSSS SPTRSRGYSC HNGTIAAA
101: CSEECRQEQI ERDEAKEKKQ NLSYSVNSAM RRKEQRSSSS SPTRSRGYSC HNGTIAAA
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.