Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007517.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX71827 | Canola | cytosol, nucleus, plastid | 97.73 | 97.73 |
| CDY23451 | Canola | nucleus | 67.05 | 62.77 |
| CDY30481 | Canola | nucleus | 65.91 | 61.7 |
| CDX95609 | Canola | cytosol, mitochondrion, nucleus | 65.91 | 61.7 |
| CDX83422 | Canola | nucleus | 65.91 | 61.7 |
| CDX74676 | Canola | cytosol | 62.5 | 60.44 |
| CDY48248 | Canola | nucleus | 60.23 | 58.24 |
| PGSC0003DMT400004241 | Potato | cytosol | 55.68 | 49.49 |
| Solyc01g088660.2.1 | Tomato | cytosol, mitochondrion, nucleus | 53.41 | 47.47 |
| VIT_15s0021g00940.t01 | Wine grape | nucleus | 53.41 | 46.53 |
| GSMUA_Achr5P12630_001 | Banana | cytosol | 48.86 | 46.24 |
| KRH48855 | Soybean | nucleus, plastid | 54.55 | 41.74 |
| KRH66418 | Soybean | plastid | 54.55 | 41.74 |
| CDY38416 | Canola | nucleus | 45.45 | 31.75 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 46.59 | 29.5 |
| CDX78788 | Canola | nucleus | 46.59 | 26.97 |
| TraesCS2A01G454800.1 | Wheat | cytosol, nucleus, plastid | 36.36 | 26.02 |
| TraesCS2B01G476700.1 | Wheat | cytosol, nucleus, plastid | 36.36 | 26.02 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 36.36 | 26.02 |
| TraesCS2D01G455000.1 | Wheat | cytosol, nucleus, plastid | 36.36 | 26.02 |
| EES12738 | Sorghum | cytosol, nucleus, plastid | 37.5 | 25.58 |
| Zm00001d002523_P001 | Maize | nucleus | 36.36 | 25.0 |
| CDY40586 | Canola | nucleus | 44.32 | 24.68 |
| EES05711 | Sorghum | cytosol | 36.36 | 24.62 |
| TraesCS6B01G289300.1 | Wheat | nucleus | 35.23 | 24.6 |
| Os04t0586000-00 | Rice | nucleus | 35.23 | 24.41 |
| TraesCS6D01G242700.1 | Wheat | nucleus | 34.09 | 23.81 |
| TraesCS6A01G262000.1 | Wheat | nucleus | 34.09 | 23.81 |
| CDY09610 | Canola | nucleus | 45.45 | 23.81 |
| CDX90460 | Canola | nucleus | 45.45 | 23.67 |
| Zm00001d051492_P001 | Maize | cytosol | 32.95 | 23.39 |
| CDY72627 | Canola | cytosol, nucleus | 44.32 | 22.94 |
| CDY12406 | Canola | nucleus | 44.32 | 21.43 |
| CDX77736 | Canola | nucleus | 44.32 | 21.2 |
| HORVU6Hr1G066610.2 | Barley | cytosol, nucleus | 35.23 | 21.09 |
| CDY33512 | Canola | nucleus | 43.18 | 20.77 |
| CDY43446 | Canola | nucleus | 38.64 | 19.43 |
| GSMUA_Achr2P10380_001 | Banana | cytosol | 52.27 | 18.47 |
Protein Annotations
| EnsemblPlants:CDY41184 | EnsemblPlantsGene:GSBRNA2T00072592001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF73 |
| PFAM:PF04570 | PFscan:PS51795 | ProteinID:CDY41184 | ProteinID:CDY41184.1 | SEG:seg | UniParc:UPI0002542FBD |
| UniProt:A0A078HV00 | MapMan:27.3.3 | : | : | : | : |
Description
BnaA09g38310DBnaA09g38310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV00]
Coordinates
chrLK032492:-:220816..221575
Molecular Weight (calculated)
10169.9 Da
IEP (calculated)
8.323
GRAVY (calculated)
-0.733
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MDSYYVRFVE NDEPHFLESC SLCRKTLSLN SDIFMYRGDM AFCSQECRQE QIESDEKKAK RWRKASSSSR SKNSVAGKAV RSETLVVS
1: MASYYSGFLG CEEPHFLESC SLCRKHLGLN SDIFMYRGDK AFCSNECREE QIESDEAKER KWKKSSRSLR KNSSETKESA AGNTVRTGTL VVA
Arabidopsis Description
At2g44670/F16B22.16 [Source:UniProtKB/TrEMBL;Acc:O80506]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.