Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os05t0530500-02 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G44670.1 | Os05t0530500-02 | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12738 | Sorghum | cytosol, nucleus, plastid | 81.89 | 80.62 |
| Zm00001d002523_P001 | Maize | nucleus | 81.1 | 80.47 |
| TraesCS2D01G455000.1 | Wheat | cytosol, nucleus, plastid | 73.23 | 75.61 |
| TraesCS2A01G454800.1 | Wheat | cytosol, nucleus, plastid | 73.23 | 75.61 |
| TraesCS2B01G476700.1 | Wheat | cytosol, nucleus, plastid | 72.44 | 74.8 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 72.44 | 74.8 |
| GSMUA_Achr5P12630_001 | Banana | cytosol | 35.43 | 48.39 |
| VIT_15s0021g00940.t01 | Wine grape | nucleus | 33.07 | 41.58 |
| KRH48855 | Soybean | nucleus, plastid | 37.01 | 40.87 |
| Os02t0686700-01 | Rice | mitochondrion | 29.13 | 40.22 |
| KRH66418 | Soybean | plastid | 35.43 | 39.13 |
| CDY48248 | Canola | nucleus | 26.77 | 37.36 |
| Bra004855.1-P | Field mustard | cytosol | 26.77 | 37.36 |
| CDX74676 | Canola | cytosol | 26.77 | 37.36 |
| AT2G44670.1 | Thale cress | cytosol, nucleus, plastid | 26.77 | 36.56 |
| PGSC0003DMT400004241 | Potato | cytosol | 28.35 | 36.36 |
| Solyc01g088660.2.1 | Tomato | cytosol, mitochondrion, nucleus | 28.35 | 36.36 |
| CDX83422 | Canola | nucleus | 26.77 | 36.17 |
| Bra000358.1-P | Field mustard | nucleus | 26.77 | 36.17 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 38.58 | 35.25 |
| CDY41184 | Canola | cytosol | 24.41 | 35.23 |
| Bra007517.1-P | Field mustard | cytosol | 24.41 | 35.23 |
| CDX71827 | Canola | cytosol, nucleus, plastid | 24.41 | 35.23 |
| CDX95609 | Canola | cytosol, mitochondrion, nucleus | 25.98 | 35.11 |
| Bra037639.1-P | Field mustard | nucleus | 25.2 | 34.04 |
| CDY30481 | Canola | nucleus | 25.2 | 34.04 |
| CDY23451 | Canola | nucleus | 25.2 | 34.04 |
| Os04t0586200-01 | Rice | cytosol | 27.56 | 33.65 |
| Os02t0687200-01 | Rice | plastid | 27.56 | 33.02 |
| Os04t0586100-01 | Rice | cytosol | 25.2 | 32.99 |
| Os04t0585900-01 | Rice | nucleus | 28.35 | 30.25 |
| Os02t0686800-01 | Rice | cytosol | 33.86 | 29.45 |
| Os04t0585700-01 | Rice | cytosol | 33.86 | 28.67 |
| Os06t0714800-01 | Rice | cytosol | 24.41 | 22.79 |
| Os06t0125200-01 | Rice | nucleus | 23.62 | 20.83 |
| GSMUA_Achr2P10380_001 | Banana | cytosol | 39.37 | 20.08 |
Protein Annotations
| EnsemblPlants:Os04t0586000-00 | EnsemblPlantsGene:Os04g0586000 | EntrezGene:4336795 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | ncoils:Coil |
| PANTHER:PTHR33059 | PANTHER:PTHR33059:SF69 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:BAF15596.1 | ProteinID:BAS90703.1 |
| ProteinID:CAE03766.2 | ProteinID:EAZ31784.1 | RefSeq:XP_015634096.1 | SEG:seg | UniParc:UPI00001B1913 | UniProt:Q7XP52 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
Protein of unknown function DUF581 family protein. (Os04t0586000-00)
Coordinates
chr4:-:29610157..29611144
Molecular Weight (calculated)
14690.2 Da
IEP (calculated)
7.150
GRAVY (calculated)
-1.017
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MARYHPTSIH DDIEAGFSGH SASPVKPAAS PRRPGGRLFC DPCDDADDLL GHHHYLDICF RCRRPLGGNR DIFMYRGDMP FCSEECRQEQ IEIDEAREQR
101: SKQTGRAEQE RQRQQKASHP RIPVWAW
101: SKQTGRAEQE RQRQQKASHP RIPVWAW
001: MELSSRKPYF IEEEEEENLA SSLSEMEAGF SGNNNNSNNH GNPQNGVVSS SRFSYGRLNS LRNSQSYYYN QYSVSSPRSV VSGRFHDFRF DIQQPHFLDS
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
101: CFLCKKPLGD NRDIYMYRGD TPFCSEECRQ EQIERDEAKE KKQNLSHSVK SAMRRKEQSS PTRSRDYAFH NGTVAAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FGQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.