Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000358.1-P | Field mustard | nucleus | 84.95 | 84.04 |
| Bra037639.1-P | Field mustard | nucleus | 84.95 | 84.04 |
| CDX83422 | Canola | nucleus | 84.95 | 84.04 |
| CDX95609 | Canola | cytosol, mitochondrion, nucleus | 84.95 | 84.04 |
| CDY23451 | Canola | nucleus | 84.95 | 84.04 |
| CDY30481 | Canola | nucleus | 84.95 | 84.04 |
| Bra004855.1-P | Field mustard | cytosol | 81.72 | 83.52 |
| CDX74676 | Canola | cytosol | 81.72 | 83.52 |
| CDY48248 | Canola | nucleus | 78.49 | 80.22 |
| PGSC0003DMT400004241 | Potato | cytosol | 54.84 | 51.52 |
| VIT_15s0021g00940.t01 | Wine grape | nucleus | 53.76 | 49.51 |
| Solyc01g088660.2.1 | Tomato | cytosol, mitochondrion, nucleus | 52.69 | 49.49 |
| KRH48855 | Soybean | nucleus, plastid | 58.06 | 46.96 |
| KRH66418 | Soybean | plastid | 56.99 | 46.09 |
| GSMUA_Achr5P12630_001 | Banana | cytosol | 44.09 | 44.09 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 48.39 | 32.37 |
| AT4G17670.1 | Thale cress | nucleus | 50.54 | 29.56 |
| TraesCS2A01G454800.1 | Wheat | cytosol, nucleus, plastid | 35.48 | 26.83 |
| TraesCS2B01G476700.1 | Wheat | cytosol, nucleus, plastid | 35.48 | 26.83 |
| TraesCS2D01G455000.1 | Wheat | cytosol, nucleus, plastid | 35.48 | 26.83 |
| HORVU2Hr1G104960.1 | Barley | cytosol, nucleus, plastid | 35.48 | 26.83 |
| Os04t0586000-00 | Rice | nucleus | 36.56 | 26.77 |
| Zm00001d002523_P001 | Maize | nucleus | 36.56 | 26.56 |
| EES12738 | Sorghum | cytosol, nucleus, plastid | 36.56 | 26.36 |
| EES05711 | Sorghum | cytosol | 35.48 | 25.38 |
| AT5G47060.2 | Thale cress | nucleus | 46.24 | 24.29 |
| Zm00001d051492_P001 | Maize | cytosol | 32.26 | 24.19 |
| TraesCS6B01G289300.1 | Wheat | nucleus | 31.18 | 23.02 |
| TraesCS6A01G262000.1 | Wheat | nucleus | 30.11 | 22.22 |
| TraesCS6D01G242700.1 | Wheat | nucleus | 30.11 | 22.22 |
| HORVU6Hr1G066610.2 | Barley | cytosol, nucleus | 30.11 | 19.05 |
| GSMUA_Achr2P10380_001 | Banana | cytosol | 50.54 | 18.88 |
Protein Annotations
| MapMan:27.3.3 | EntrezGene:819075 | UniProt:A0A178VTM1 | ProteinID:AAC27469.1 | ProteinID:AEC10453.1 | EMBL:AF325088 |
| EMBL:AK228057 | ArrayExpress:AT2G44670 | EnsemblPlantsGene:AT2G44670 | RefSeq:AT2G44670 | TAIR:AT2G44670 | RefSeq:AT2G44670-TAIR-G |
| EnsemblPlants:AT2G44670.1 | TAIR:AT2G44670.1 | EMBL:AY048280 | EMBL:AY088046 | EMBL:BT001142 | GO:GO:0005575 |
| GO:GO:0008150 | InterPro:IPR007650 | RefSeq:NP_566023.1 | UniProt:O80506 | ProteinID:OAP09770.1 | PFAM:PF04570 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51795 | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF73 | UniParc:UPI00000AC050 | InterPro:Zf-FLZ_dom | SEG:seg |
Description
At2g44670/F16B22.16 [Source:UniProtKB/TrEMBL;Acc:O80506]
Coordinates
chr2:+:18425111..18426121
Molecular Weight (calculated)
10522.3 Da
IEP (calculated)
7.848
GRAVY (calculated)
-0.765
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MASYYSGFLG CEEPHFLESC SLCRKHLGLN SDIFMYRGDK AFCSNECREE QIESDEAKER KWKKSSRSLR KNSSETKESA AGNTVRTGTL VVA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.